Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00786 ATGGCTTTTTCAACATTGCTCTCTTTTACTCTCTTCCTCTGTGTCTTATTGCCCTGTTTCGCTTCTTCTTTGGAAGCGAAACCAATCTCTTCTCTCATTAGAAAGAAGTTTTTTGATACCATGTTCCTACATAAAGATGACAATGCATGCCCTGCTAAGAACTTCTACCCTTACAAGGCCTTCATTCGCGCCGCGAAAACCTTCCCTGAATTCGGCACCACCGGCAGTTTAGACACACGGAAGCGTGAGATCGCTGCATTTCTTGCTCAAATTTCTCATGAGACGACTGGTGGATGGGCTACTGCACCTGATGGTCCATATGCTTGGGGTCTCTGCTTTAAGGAAGAGATTAATCCTCAGAGTAACTACTGTGATTCTACTAACAAACAATGGCCTTGTTTCCCAGGAAAATCTTACCATGGAAGAGGACCCATTCAACTTTCTTGGAACTACAATTATGGTCCAGCAGGGAAGGAGTTGGGATTTGATGGGTTGAGGAAGCCTGAGATTGTGTCAAACAATTCAGTGATTGCATTCAGAAGTGCTCTGTGGTTTTGGATGAGAGAGACAAGAGGAACACTTTCTTGCCACAATGTTATGGTTGGAAAATATGTGCCTTCAGAAGCCGACATAGCAGCAAACAGAACAGCTGGTTATGGCTTGGTTACTAACATCATCAATGGTGCACTTGAATGTGGAATCCCCAATGATCCAAGGGTCAAGGATAGGATTGGATTTTTCAAAAGATATACCAACTTGTTCAACGTCGATACTGGACCTAACTTGGATTGTGCATTTCAGAAACCCTTGTAA 813 0.433 MAFSTLLSFTLFLCVLLPCFASSLEAKPISSLIRKKFFDTMFLHKDDNACPAKNFYPYKAFIRAAKTFPEFGTTGSLDTRKREIAAFLAQISHETTGGWATAPDGPYAWGLCFKEEINPQSNYCDSTNKQWPCFPGKSYHGRGPIQLSWNYNYGPAGKELGFDGLRKPEIVSNNSVIAFRSALWFWMRETRGTLSCHNVMVGKYVPSEADIAANRTAGYGLVTNIINGALECGIPNDPRVKDRIGFFKRYTNLFNVDTGPNLDCAFQKPL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00786 270 PANTHER CHITINASE-RELATED 25 269 - -
Aip06g00786 270 PANTHER OS05G0138200 PROTEIN 25 269 - -
Aip06g00786 270 CDD chitinase_GH19 33 264 - -
Aip06g00786 270 Pfam Chitinase class I 33 264 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aip06g00786 270 ProSitePatterns Chitinases family 19 signature 2. 177 187 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aip06g00786 270 Gene3D - 36 269 - -
Aip06g00786 270 PIRSF Endochitinase 8 270 IPR016283 GO:0004568|GO:0005975
Aip06g00786 270 Gene3D Endochitinase, domain 2 115 173 - -
Aip06g00786 270 SUPERFAMILY Lysozyme-like 29 269 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00786 Aip-Chr6 10436246 10437787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00786 28 270 Glycoside Hydrolase AT4G01700 70.370 2.96e-137 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00786 - - gmx:100784196 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00786 06 10436246 10437787 Aip09g01397 09 24596859 24599135 PCT