Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01336 ATGGTGGTAGCTTCTTCGATGATGATAAGGACGAAGAAAACAAAGGCGGTTGGGATTCCAACAATTGACCTCTCAATGGAGAGGGCAGAGTTGTCAAAGCAAGTGGTGAAGGCTTGTGAGGAATATGGATTCTTCAAAGTGGTGAATCATAGTGTGGGTAAAGAGGTCATTTCGACATTGGAAGAGCAAGGGGCTGAGTTTTTCTCCAAAACCGCCGCTGAAAAGCACCGTGCCGGCCCTGCCACCCCCTTTGGCTACGGCTGCAGAAATATTGGTCCTAATGGCGACATGGGTGACCTTGAGTACCTTCTTCTCCACACAAATCCTCTCACCATCTCTGACAGATCCAAAACCATTTCCAATGACCCTATCAAATTCAGTTGCGCAGTAAACGATTACATAGAATCAACGAGGGAGCTAGCATGTGAGATTCTTGATCTAGTGGGTGAAGGTCTACGGCTCCAAGATAAGTACTCACTAAGCAAGCTAATCAGAGACGTTCAAAGTGATTCGCTGCTTCGGATCAACCACTACCCTCAGATGGTGAAACCGAAGTCGTGGGACCCATCATTGATGAAGGGGAACAGCAATAGCAGCATTGGGTTTGGGGAGCATTCTGACCCTCAGATCTTGACGATCCTACGGTCCAACAACGTTGGTGGGCTTCAGATCTCAACTCATGACGGGCTGTGGATCCCTGTCCCCCCGGACTCTAACGAATTCTTCGTTATGGTCGGCGATGCACTCCAGGTATTGACAAACGGAAGGTTTACAAGTGTGAGACACAGAGCATTGACAAACCCATTGAAGTCAAGAATGTCAATGATGTATTTTGCAGCACCACCGCTGAATTGGTGGATCACACCACTGTCTAAGATGGTGACACCTCACAACCCAACCCTTTATAAGCCTTTCACTTGGGCCCAATACAAACAAGCTGCTTACTCTTTGAGATTGGGTGCCTCTCGTCTTGACCTCTTCAAGCTCCAACAACAACAAGATTCCAATCTTGTCCCTCCTTCACCCTAA 1029 0.4772 MVVASSMMIRTKKTKAVGIPTIDLSMERAELSKQVVKACEEYGFFKVVNHSVGKEVISTLEEQGAEFFSKTAAEKHRAGPATPFGYGCRNIGPNGDMGDLEYLLLHTNPLTISDRSKTISNDPIKFSCAVNDYIESTRELACEILDLVGEGLRLQDKYSLSKLIRDVQSDSLLRINHYPQMVKPKSWDPSLMKGNSNSSIGFGEHSDPQILTILRSNNVGGLQISTHDGLWIPVPPDSNEFFVMVGDALQVLTNGRFTSVRHRALTNPLKSRMSMMYFAAPPLNWWITPLSKMVTPHNPTLYKPFTWAQYKQAAYSLRLGASRLDLFKLQQQQDSNLVPPSP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01336 342 Gene3D - 3 318 IPR027443 -
Aip09g01336 342 Pfam 2OG-Fe(II) oxygenase superfamily 170 280 IPR044861 -
Aip09g01336 342 PRINTS Isopenicillin N synthase signature 35 52 - -
Aip09g01336 342 PRINTS Isopenicillin N synthase signature 205 226 - -
Aip09g01336 342 PRINTS Isopenicillin N synthase signature 241 267 - -
Aip09g01336 342 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 4 330 - -
Aip09g01336 342 SUPERFAMILY Clavaminate synthase-like 10 319 - -
Aip09g01336 342 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 289 IPR005123 -
Aip09g01336 342 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 330 - -
Aip09g01336 342 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 83 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01336 Aip-Chr9 22603857 22609529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01336 10 329 Glycosyltransferase AT5G59530 27.729 2.07e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01336 K04125 - gmx:100779525 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01336 09 22603857 22609529 Aip09g01336 09 22603857 22609529 ECH
Aip06g00731 06 9721331 9727143 Aip09g01336 09 22603857 22609529 PCT