Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00731 ATGATAGTGCCATCTCTAAACACAGACACTAGTATGAATTCGAAGGCTACAAGAACAAAGAGGAAAACAAAGGAAGAAACAACAATGGCAATTCCAAGAATTGACCTATCGATGGAAAATAGGTCAGAGTTGTCGGAACAAGTGGTGAAGGCGTGTGAGGAATTCGGAATCTTTAAGGTTGTGAATCACAAAGTTCCAAGAGAAGTGATTTTGAGAATGGAAGAGGAAGGTGCTGAGTTCTTTGCCAAAACCAGCTCGGAGAAGCAACAAGCTAGCCTACCAAACCCTTTTGGCTATGGATGCAACAACATTGGTAACAATGGCGATGTCGGTGACCTTGAGTATCTCCTTCTTCACACCAATCCTCTCTTCATCTCTCAATCTTCCAAATCCATCTCCAATCACCCAAACAAGTTCAGCGGTGCTGTGAATGATTACATAGAAGGAGCCAAAAGAGTAGCATGTGAGATTCTTGATCTTGTGGTAGAGGGTTTGGGGGTCCAAGACAAGTTTGCACTTAGCAAGCTAATCAAAGACGTGCAAAGTGACTCAGTGCTGAGGATCAATCACTACCCTCCCAACATGAACAAAATTAAACAAAGTACTTGGGATTGGGACATGGACCCATGTGCTACTTCAAGTTCAAAACTAGGTAACACCAACAATGCCATTGGCTTTGGGGAACACTCTGACCCTCAGATCCTCACCATCATGAGCTCCAACGACGTCGCCGGCCTCCAGGCCACCACCCACCACGGCATCTGGTTCACTGTCCCTCCTGACCCGCCTCACTTCTTCGTCATGGTCGGCGATGCCCTCCAGGTTTTTACAAATGGAAGGTTTACAAGTGTGAGACACAGGGTGCTGACTAACACACTGAAGGCAAGGATGTCAATGATGTACTTCGGAGCACCGCCACTGAATTGGTGGATCACTCCGCTGCCGGAGATGGTTTCATCACCGCAAAACCCAAGTCGGTATAAGCCCTTCACATGGGGTCAGTACAAGAAAGCTGTATACTCTCTTAGACTTGGGGACTCTCGGCTTGACCAGTTTAAGGTTCACCATGACACCCCTTATTAG 1083 0.4672 MIVPSLNTDTSMNSKATRTKRKTKEETTMAIPRIDLSMENRSELSEQVVKACEEFGIFKVVNHKVPREVILRMEEEGAEFFAKTSSEKQQASLPNPFGYGCNNIGNNGDVGDLEYLLLHTNPLFISQSSKSISNHPNKFSGAVNDYIEGAKRVACEILDLVVEGLGVQDKFALSKLIKDVQSDSVLRINHYPPNMNKIKQSTWDWDMDPCATSSSKLGNTNNAIGFGEHSDPQILTIMSSNDVAGLQATTHHGIWFTVPPDPPHFFVMVGDALQVFTNGRFTSVRHRVLTNTLKARMSMMYFGAPPLNWWITPLPEMVSSPQNPSRYKPFTWGQYKKAVYSLRLGDSRLDQFKVHHDTPY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00731 360 Pfam non-haem dioxygenase in morphine synthesis N-terminal 31 106 IPR026992 -
Aip06g00731 360 MobiDBLite consensus disorder prediction 1 26 - -
Aip06g00731 360 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 17 355 - -
Aip06g00731 360 PRINTS Isopenicillin N synthase signature 48 65 - -
Aip06g00731 360 PRINTS Isopenicillin N synthase signature 229 250 - -
Aip06g00731 360 PRINTS Isopenicillin N synthase signature 265 291 - -
Aip06g00731 360 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 181 313 IPR005123 -
Aip06g00731 360 SUPERFAMILY Clavaminate synthase-like 26 346 - -
Aip06g00731 360 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 17 355 - -
Aip06g00731 360 Gene3D - 7 337 IPR027443 -
Aip06g00731 360 Pfam 2OG-Fe(II) oxygenase superfamily 183 303 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00731 Aip-Chr6 9721331 9727143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00731 22 354 Glycosyltransferase AT5G59530 26.611 3.65e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00731 K04125 - gmx:100779525 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00731 06 9721331 9727143 Aip06g00731 06 9721331 9727143 ECH
Aip06g00731 06 9721331 9727143 Aip09g01336 09 22603857 22609529 PCT