Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01306 ATGGAAGATTTTGGTGGTTCCGGGTTTGATGGCCTTAGTAATGCTGTGAGGAGGAAGAGGAGTCAAACTTCTCGCAGGCCTCGACCAGATTCGCAGCCTGTACCTGATGGTACCGACTTGTCTCCCTTGTCGTCAACACCCCCTTCAGATGATGTTAGCAGGGTCTCTAGTGAAGAGAATGCTGAAGACGATAAATCCCATAAGGATGGTGGGTTCAATGTGTTTTATAGTAATGAGCCTGGGCGAAGCAGCTTACAAAACAAACGCTGTAGCGAGGGTGTTCTTGCTCCAGCTAATTGGAAGGGTTCTAGCAAATCAAAGGATAGCTTAGAATCAGAATTGGGAAATGCAGAGATGTATGGTGGAAGTAATCCAGATAGTCCGAGTTTAGGGCAGTTTGGTGTTTCTCAGGATCCATTAGGGAATGAGAATCGTGTTAAAAAGGTGAAGCTGAAGGTTGGTGGTGTTACACGTACTATTCAAGCCAACTCTGCATCAAACAGTACTTCAGCTAGTGGATCAACTACAAAGAGCTCTCGATCATCAGATGCCACTAGATCACGCCACAAGCATCAGAGCAATTCAGATGATAACCAGTCTCCCTTGGATAAGAGAAGTGGCCTGCAAGGCCTGCCGTGGAAGGATTTCTCAAGTCAGGACTCATTAATTGGGAGGTTATCTGGAAAAAATAAATTAAGCAAGCAAGGAGACAAGTCTGAATCAGTCCGGAAGAGCAAGCGAGTACCAAAGAGGCGTGTACTTGACGACGAATTTGGTGATGAGGATGATGAGGATGATGAGATTCGTTATCTGGAAAAGCTGAAAACATCAAAAGTTTCTGCTGTATATAGAGATGAAGAGGAATTAGGCAAGAAACATAAAAAGCTTTCTAGCATGGAAAATGCAGCCTCAACAAAATCAAGCAAAGATGGGAAGAAAAGGTTTAGACCAGATAGAGTGTATGAGGATGTGGATTATGAGGAAGAGGATGAGTCTGGGTCTGATGTTGAGGTTGAGGATAAGAAAAAGAAAAAACAGAGGAAGGAATCTGTTGATGTTTTGATGGACAGTAAAAGGGAAATAACTCTAACTACACGTCAACGGGCTCTTCAATCCAGCAAAGATGCCTCTGCACCTGGTTCAAGTTTAATTGAGTTCCCCAATGGATTACCACCTGCCCCGCCTAGAAAGCAAAAGGAGAAGCTTACAGAAGTGGAGCAGCAACTAAAGAAAGCTGAGGCTGCCCAGAGGCGTAAAATGCAAAATGAGAAGGCTGCCCGGGAGTCTGAGGCTGAAGCTATAAGAAAAATTCTTGGTCAAGATTCTAGTAGGAAGAAGCGGGAAGAGAAAATGAAGAAACGCCAAGAAGAATTGGCTCAGAGGGCAGCCAATGCACAAATGCTTGCATCAAACACTATTAGATATGTGATGAGTCCTAATGGTACAGTTGTGACATTTCCTGATGAAATGGGCCTCCCTAGTATATTCAATTCAAAACCGTGCAGTTATCCTCCATCACGGGAGAGATGTGCCGGTCCGTCATGTCCCAACCCTTACAAGTATCGCGATTCAAAATCAAAGCTTCCTCTTTGCAGTCTCCAATGTTACAAAGCAGTCCGAGAGAAGATGGCTGCTGAAGCTATCTGTTGA 1650 0.443 MEDFGGSGFDGLSNAVRRKRSQTSRRPRPDSQPVPDGTDLSPLSSTPPSDDVSRVSSEENAEDDKSHKDGGFNVFYSNEPGRSSLQNKRCSEGVLAPANWKGSSKSKDSLESELGNAEMYGGSNPDSPSLGQFGVSQDPLGNENRVKKVKLKVGGVTRTIQANSASNSTSASGSTTKSSRSSDATRSRHKHQSNSDDNQSPLDKRSGLQGLPWKDFSSQDSLIGRLSGKNKLSKQGDKSESVRKSKRVPKRRVLDDEFGDEDDEDDEIRYLEKLKTSKVSAVYRDEEELGKKHKKLSSMENAASTKSSKDGKKRFRPDRVYEDVDYEEEDESGSDVEVEDKKKKKQRKESVDVLMDSKREITLTTRQRALQSSKDASAPGSSLIEFPNGLPPAPPRKQKEKLTEVEQQLKKAEAAQRRKMQNEKAARESEAEAIRKILGQDSSRKKREEKMKKRQEELAQRAANAQMLASNTIRYVMSPNGTVVTFPDEMGLPSIFNSKPCSYPPSRERCAGPSCPNPYKYRDSKSKLPLCSLQCYKAVREKMAAEAIC 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01306 549 MobiDBLite consensus disorder prediction 122 139 - -
Aip09g01306 549 MobiDBLite consensus disorder prediction 157 181 - -
Aip09g01306 549 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 549 - -
Aip09g01306 549 Coils Coil 402 432 - -
Aip09g01306 549 MobiDBLite consensus disorder prediction 336 363 - -
Aip09g01306 549 Pfam HIT zinc finger 507 537 IPR007529 -
Aip09g01306 549 MobiDBLite consensus disorder prediction 182 198 - -
Aip09g01306 549 MobiDBLite consensus disorder prediction 285 458 - -
Aip09g01306 549 MobiDBLite consensus disorder prediction 306 322 - -
Aip09g01306 549 Pfam PAPA-1-like conserved region 406 490 IPR006880 GO:0031011
Aip09g01306 549 MobiDBLite consensus disorder prediction 364 379 - -
Aip09g01306 549 MobiDBLite consensus disorder prediction 37 54 - -
Aip09g01306 549 PANTHER INO80 COMPLEX SUBUNIT B 1 549 IPR029523 GO:0006338|GO:0031011
Aip09g01306 549 SMART PAPA_1_2 406 490 IPR006880 GO:0031011
Aip09g01306 549 Coils Coil 445 465 - -
Aip09g01306 549 MobiDBLite consensus disorder prediction 397 458 - -
Aip09g01306 549 MobiDBLite consensus disorder prediction 1 265 - -
Aip09g01306 549 MobiDBLite consensus disorder prediction 231 257 - -
Aip09g01306 549 MobiDBLite consensus disorder prediction 285 299 - -
Aip09g01306 549 MobiDBLite consensus disorder prediction 212 228 - -
Aip09g01306 549 MobiDBLite consensus disorder prediction 55 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01306 Aip-Chr9 21798766 21802683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01306 - - gmx:100814323 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01306 09 21798766 21802683 Aip06g00703 06 9326959 9330536 ECH
Aip09g01306 09 21798766 21802683 Aip09g01306 09 21798766 21802683 ECH
Aip06g00703 06 9326959 9330536 Aip09g01306 09 21798766 21802683 ECH