Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00703 ATGGTCGTTTCTGAAGAATCAGGTCAGCTGCAGATGAACCTCCAAATTTTTTGTTGTCTCTTTCTTCTTCTTCGCCTCTTTTCCTTCCCCAAAACCCGCGCCCTACACAGAAAAGGCGCGAGCTTTGGTACTCCCACTTCTGCTGTCCCACCCAATAATTCCCTCCGATCCAATTTCCAACAGAACAACAAGAACCCGTTACTCTCCCCAATTCCTTCTGCTTCGATCAAACCCTATCGCTATGCCCTCCAATCTCAGTTCGCTGCAATAGCCCAGACGCAAAATTCTCTTGCTGCATCACTCACTGGGGTCATTGTTGTTTATGAGGGTTTCCCCTCAGCAGTAGTTGAAGGGGCACTGGAAAACTCAACCCCCCCTTCAGAGGATGCTGGCAAGGCCTCCAGTGACGAGATTGCTGGTTATGATACTAATTCCAAGAGAAAAGAATTCAGTCTTAATCATTGTGTTTCTCAGGCCTCCTCTGCTACTGGAGCTGAGGATAATAAATCCCTAAGGAAGAGTAATAAGGATGAAGGATTCCATGTGTTATATAATAATGAACCTGGAAGGAGTGGTTCGAATAATAAACGCTGTAGCGAAGGTGTTCTTGCTCCAGCTAATTGGAAAGGGTCTAATAAATCAAAGGAGAGCTTTGAGTCAGAATCAAGAAATGCAGATATGTATGGTGAAAGGAATCCTGAGAGTATGAGTGTGGGGCAGCTTGGTGTCACCCAAGATGGATTGGGGAATAAGAACAAGGTTAAGAAGGTTAAACTCAGGGTTGGTGGTGTGACACGTACCATTCAATCTAACTCGTCGTCTAATGGTGCTTCAGGAATTGGAACAACTATGAAAAGTACACGCTCTTCAGATGCCTCAAGATCACGCCAAAAGCAACAGAATAATTCTGACGATAATCATTCTCCTTCTGAAAAGAGGGGCGGCTTACAAGGCCTTCGGTGGAAGGGATCCTCAAGGGGTTGTTTTAGTCTTGGGAAGGAGGAGTCACTGATGGGGAGGACATCTGGAAAAAACACATCTGGTCAGAAAAGAGACAAATCTGAACCAGTTCGTAAGAGCAAGCGAGTACCAAAAAGGCGAGTACTGGATGGAGAATTTGGTGATGACGATGATGAGGATGATGAGATTCGGTATTTGGAGAAGCTGAAAACATCGAAAGTTTCTGCAGTGTATAGAGATGAAGAAGAATTGAGTAAGAAGCATCGAAAACTCTCTAGTGTATCCAATTTGGAAAATGCTGCATCATCAAGATCAGGCAGAGATGGCAAGAAAAGGTCTAGATTCGAGGACACTGACTATGAGGCTGAAGAGGAGTCAGGTTCTGATGGCGAGCTTGAGGACAAGAAAAAGAAAAAACAGAGGAAAGAATCAGTTGATGTATTGATGGATGGTAAGAAGGAAATGACTCTCACTACACGTCAACGGGCCCTTCAATCAAGCAAAGATGCCTCAGCATCTGGTGCAAGTTTAATTGAGTTTCCCAATGGATTACCACCTGCCCCACCTAGAAAGCAAAAGGAGAAGCTTACAGAGGTGGAGCAGCAACTGAAGAAAGCCGAGGCTGCTCAAAGGCGTAAAATGCAGGTTGAGAAGGCTGCCAGAGAATCTGAGGCTGAAGCTATCAGAAAAATACTTGGTCAAGATTCCAGCAGGAAGAAGCGAGAAGAGAAAATAAAGAAGCGTCAACAAGAACTGGCAGAGGAGAAAGCAGCCAATGCAAGAATGCTTGCATCAAACACCGTGAGATATGTGATGGGTCCCTCTGGGACAGTTGTGACCTTTCCCGAGGAAATGGGGCTCCCTAGCATATTGAACTCCAAACCCATCAGTTATCCTCCACCGCGTGAGAAGTGTGCTGGTCCATCTTGTAGCAATCCATATAAGTATCGGGATTCAAAATCAAAGCTTCCTCTTTGCAGTCTCCAATGCTACAAGGCAGTCCAGGAGAATATGGCAGCCGCAACTAGAGCATGA 1995 0.4531 MVVSEESGQLQMNLQIFCCLFLLLRLFSFPKTRALHRKGASFGTPTSAVPPNNSLRSNFQQNNKNPLLSPIPSASIKPYRYALQSQFAAIAQTQNSLAASLTGVIVVYEGFPSAVVEGALENSTPPSEDAGKASSDEIAGYDTNSKRKEFSLNHCVSQASSATGAEDNKSLRKSNKDEGFHVLYNNEPGRSGSNNKRCSEGVLAPANWKGSNKSKESFESESRNADMYGERNPESMSVGQLGVTQDGLGNKNKVKKVKLRVGGVTRTIQSNSSSNGASGIGTTMKSTRSSDASRSRQKQQNNSDDNHSPSEKRGGLQGLRWKGSSRGCFSLGKEESLMGRTSGKNTSGQKRDKSEPVRKSKRVPKRRVLDGEFGDDDDEDDEIRYLEKLKTSKVSAVYRDEEELSKKHRKLSSVSNLENAASSRSGRDGKKRSRFEDTDYEAEEESGSDGELEDKKKKKQRKESVDVLMDGKKEMTLTTRQRALQSSKDASASGASLIEFPNGLPPAPPRKQKEKLTEVEQQLKKAEAAQRRKMQVEKAARESEAEAIRKILGQDSSRKKREEKIKKRQQELAEEKAANARMLASNTVRYVMGPSGTVVTFPEEMGLPSILNSKPISYPPPREKCAGPSCSNPYKYRDSKSKLPLCSLQCYKAVQENMAAATRA 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00703 664 MobiDBLite consensus disorder prediction 424 439 - -
Aip06g00703 664 MobiDBLite consensus disorder prediction 158 249 - -
Aip06g00703 664 Pfam HIT zinc finger 621 652 IPR007529 -
Aip06g00703 664 MobiDBLite consensus disorder prediction 214 228 - -
Aip06g00703 664 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 122 661 - -
Aip06g00703 664 Coils Coil 516 546 - -
Aip06g00703 664 MobiDBLite consensus disorder prediction 400 514 - -
Aip06g00703 664 MobiDBLite consensus disorder prediction 531 575 - -
Aip06g00703 664 MobiDBLite consensus disorder prediction 449 477 - -
Aip06g00703 664 PANTHER INO80 COMPLEX SUBUNIT B 122 661 IPR029523 GO:0006338|GO:0031011
Aip06g00703 664 MobiDBLite consensus disorder prediction 346 372 - -
Aip06g00703 664 MobiDBLite consensus disorder prediction 531 578 - -
Aip06g00703 664 MobiDBLite consensus disorder prediction 119 138 - -
Aip06g00703 664 Coils Coil 558 578 - -
Aip06g00703 664 MobiDBLite consensus disorder prediction 478 493 - -
Aip06g00703 664 MobiDBLite consensus disorder prediction 264 381 - -
Aip06g00703 664 SMART PAPA_1_2 520 605 IPR006880 GO:0031011
Aip06g00703 664 MobiDBLite consensus disorder prediction 264 297 - -
Aip06g00703 664 Pfam PAPA-1-like conserved region 520 605 IPR006880 GO:0031011
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00703 Aip-Chr6 9326959 9330536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00703 - - adu:107492293 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00703 06 9326959 9330536 Aip06g00703 06 9326959 9330536 ECH
Aip09g01306 09 21798766 21802683 Aip06g00703 06 9326959 9330536 ECH
Aip06g00703 06 9326959 9330536 Aip09g01306 09 21798766 21802683 ECH