Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01289 ATGGAAAAGAAAGAGCAAAAGATTATGGTGGCTGTGGATCAGAGTGAGGAAAGCATGCATGCACTGTCATGGTGCCTAAGCAATCTTATTTCAGATACCAATAAAAAGAAGCTTCTTCTGCTCCATGTCAAGCCTCCTCCTGCTATCTGCTCCTTCGACACTGCAGGGTATGTGTTTTCCCCTGAAGTTATTGCTGCTATGGAAAAGTACAGTATGGAGCTTGCTAATTCAGTAATGGATAAAGCTGAAGCCATTTGCAGAAATTTGAACGCCGCCGATATAACTATGGAGAGAGTAATTGAGATGGGAGATGCAAAGAATGTAATTTGCAGTACAGTGCAGAAGTTAGATGCTGACACTTTGGTCATGGGAAGCCATGGTTATGGATTCTTCAAGAGAACACTCCTTGGAAGTGTGAGCGACCACTGTGCCAAGCATGCAAAGTGTCCTGTTATAATCGTCAAACAACCATGA 474 0.4304 MEKKEQKIMVAVDQSEESMHALSWCLSNLISDTNKKKLLLLHVKPPPAICSFDTAGYVFSPEVIAAMEKYSMELANSVMDKAEAICRNLNAADITMERVIEMGDAKNVICSTVQKLDADTLVMGSHGYGFFKRTLLGSVSDHCAKHAKCPVIIVKQP 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01289 157 PRINTS Universal stress protein signature 5 23 IPR006015 -
Aip09g01289 157 PRINTS Universal stress protein signature 115 127 IPR006015 -
Aip09g01289 157 PRINTS Universal stress protein signature 133 155 IPR006015 -
Aip09g01289 157 Gene3D HUPs 1 157 IPR014729 -
Aip09g01289 157 CDD USP_Like 7 154 - -
Aip09g01289 157 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 156 - -
Aip09g01289 157 Pfam Universal stress protein family 6 155 IPR006016 -
Aip09g01289 157 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 156 - -
Aip09g01289 157 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01289 Aip-Chr9 21481820 21484657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01289 2 44 Receptor kinase-like Gene Family AT5G35380 48.837 2.33e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01289 - - gmx:100306535 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00879 06 12155390 12157390 Aip09g01289 09 21481820 21484657 ECH
Aip09g01289 09 21481820 21484657 Aip09g01289 09 21481820 21484657 ECH
Aip06g00686 06 9130137 9131769 Aip09g01289 09 21481820 21484657 ECH