Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00879 ATGGCAGAAGAGGCAGAGAACGAACGGAGGGTTCTGGTAGCAGTGGACGAAGGCGATGAGAGCATGTATGCCCTCTCATGGTGCCTCAACAACCTCGTCTTCCAAAATTCCAAAAATACCCTTATCCTTCTCTATGTAAACCCACCACGTGGCGGTTATATGCCCTTTGAAACCGCAGCCGCACTAGATGATCCTGAAACTCATCCAGCAAATCTGTATTCGCCGGAAATAACGGCAGCCATGGAAAGATATAGCCAAGAAGTGGCAGATTGCGTGTTAGCGAAAGCCAAGAAATTGTGTAAAGATCTCCAACACGTTAAGGTGGAGACGAGAGTAGAGGATGGCGATCCAAGGGACGTGATTTGTGAGATGGCTGAAAAGTTGGGTGCTCATGTTCTTGTTATGGGAAGCCACGGTTATGGTCTTATCAAGAGGACTTTTCTTGGAAGTGTGAGCAGTCACTGCGCACAGAACGTTAAGTGCCCAGTTCTCATAGTCAAGAAGCCAAAATCAATTGCTGATGCTGGAGACGAAACATATCAATCGGAATAA 552 0.4692 MAEEAENERRVLVAVDEGDESMYALSWCLNNLVFQNSKNTLILLYVNPPRGGYMPFETAAALDDPETHPANLYSPEITAAMERYSQEVADCVLAKAKKLCKDLQHVKVETRVEDGDPRDVICEMAEKLGAHVLVMGSHGYGLIKRTFLGSVSSHCAQNVKCPVLIVKKPKSIADAGDETYQSE 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00879 183 CDD USP_Like 10 166 - -
Aip06g00879 183 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 172 - -
Aip06g00879 183 Gene3D HUPs 3 178 IPR014729 -
Aip06g00879 183 PRINTS Universal stress protein signature 8 26 IPR006015 -
Aip06g00879 183 PRINTS Universal stress protein signature 127 139 IPR006015 -
Aip06g00879 183 PRINTS Universal stress protein signature 145 167 IPR006015 -
Aip06g00879 183 Pfam Universal stress protein family 9 167 IPR006016 -
Aip06g00879 183 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 169 - -
Aip06g00879 183 PANTHER OS05G0357525 PROTEIN 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00879 Aip-Chr6 12155390 12157390 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00879 - - adu:107492166 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00879 06 12155390 12157390 Aip09g01289 09 21481820 21484657 ECH
Aip06g00879 06 12155390 12157390 Aip06g00879 06 12155390 12157390 ECH
Aip06g00879 06 12155390 12157390 Aip09g01593 09 32483578 32485110 PCT