Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01283 ATGGCTGTCACCACTTCCTATCTAAATATCACTGAAAAGAAGCACTGGTGGCTCACCAACCGAAGGATTGTTGAGAAATACATAAAGGACGCTCGTAGCCTCATTGCAACGCAAGAGGAGAGCGAGATCATTTCCGCTCTGAGTTTGTTGGACGCTGCTCTAGCCTTGTTTCTGAGACTAGAGCAAGCACTGGAACTCAGAGCGAGGTGTCTACTCTCCTTACGGAGGTTCAAAGACGTAGCAGATATGCTTCAGGATTACATCCCAAGCCTCAGAATTTCCGACGAAGATTCTTCTTCTTCTTCTTCTTCTTCTTATAGCGGTTTCTCTTCGCAGAGTCTTTCAAGAGAAGGCGTGAAGCTTCTTTCTTCTTCGTCCTTTTCTTCTTCATCTGATTCTTCTTCTTGTTCTTTTTCTCCTTCACCTGGTAGAGATCAGAGCTTCACGTGCTTCTCTGTTTCGCACTTGAAGAAGAAGCTCATGGCTGCGATCTGTAAGAGTTGCGAGAAGGAAGGGCATTGGAGATACTTAGTACTTGGCAAAGCATGCTACCACTTAGGCCTAATGGAAGACGCAATGATTCTCCTCCAAACCGGCAAGCGCCTAGCTACGGCCGCCTTCCGCCGCGAAAGCATCTGCTGGTCTGACGACAGCTTCTCCCTCTCCCTCTCCACCGCCGCCACAGCACCACCGTCCAGCCCTCTCACCGAATCGGAGTCCATAACCCAGCTCCTGTCCCACATCAAGCTCCTCCTCCGTCGTCGGGCCGCAGCACTGGCCGCCCTTGACGCCGGGGTCCACACGGAGGCCATCCGCCACTTCTCGAAGATCATCGAGTCCCGGCGCGGTGTGACGCCACAGGGCTTCCTCTCGCAGTGCTACGCGCATCGTGCCTCCGCCCAGCGGCACGCATGGCGAATAGCGGACGCAATCGCGGACTGTAACCGCGCGCTGGCGCTGGAAGCGACGAGCATCGAAGCACTCCACACACGCGCGTCGGTGCTTGAAATGATTAAGTGCCTTCCTGATTCTCTGCATGACCTTGAACACTTAAAGCTTCTCTACAACTCCATTCTTCGTGACCGCAAGCTCCCTGGACCCGCCTGGAAGCACCACAATGTTAGGTACGTAGAGATCCCGGGAAGGCTCTGCACTCTGAGCACCAAGATCAAAGAACTCAAGCAGAGAGTGGCAAATGGCGAAACAGGAAACAACGTTGATTACTACGCTTTGATTGGTTTGAGGCGTGGGTGTTCTCGGTCGGAGCTTCAGAGGGCACATCTTTTGCTCTGTTTGAAGCATAAGCATGAGAAGGCTCTGAGCTTCATTGATCGCTGCGAGCTTGCAGACCAACGAGACATTGAGGATGTTAAGGAAAGGGCCAAGATGTCTGCAACGTTGTTATACAGGTTGATTCAGAAAGGTTATGCTGAAATTATGGCGAACATCACAAACGAGGAAGCTTTGAAGGAACAGAGGAAGAGGGCTTTGCACGATGATAATAATAGTAATGAAGATAGTAATGAGAGTGGGTTGGTTTGTTCATCTGCTTCGACTACAAATCCTTCGTTGCTTCAAGGAGTGTTTTGTAGGGACCTAACTATGGTTGGGAACTTACTTTCTCAAGCTGGGTTTAACCCTTCCATTTCCGTGAAGTATGAGGCTTTGAGTTGCTAG 1677 0.5081 MAVTTSYLNITEKKHWWLTNRRIVEKYIKDARSLIATQEESEIISALSLLDAALALFLRLEQALELRARCLLSLRRFKDVADMLQDYIPSLRISDEDSSSSSSSSYSGFSSQSLSREGVKLLSSSSFSSSSDSSSCSFSPSPGRDQSFTCFSVSHLKKKLMAAICKSCEKEGHWRYLVLGKACYHLGLMEDAMILLQTGKRLATAAFRRESICWSDDSFSLSLSTAATAPPSSPLTESESITQLLSHIKLLLRRRAAALAALDAGVHTEAIRHFSKIIESRRGVTPQGFLSQCYAHRASAQRHAWRIADAIADCNRALALEATSIEALHTRASVLEMIKCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKHHNVRYVEIPGRLCTLSTKIKELKQRVANGETGNNVDYYALIGLRRGCSRSELQRAHLLLCLKHKHEKALSFIDRCELADQRDIEDVKERAKMSATLLYRLIQKGYAEIMANITNEEALKEQRKRALHDDNNSNEDSNESGLVCSSASTTNPSLLQGVFCRDLTMVGNLLSQAGFNPSISVKYEALSC 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01283 558 MobiDBLite consensus disorder prediction 125 144 - -
Aip09g01283 558 PANTHER - 1 558 - -
Aip09g01283 558 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 558 - -
Aip09g01283 558 MobiDBLite consensus disorder prediction 492 515 - -
Aip09g01283 558 Gene3D Tetratricopeptide repeat domain 223 364 IPR011990 GO:0005515
Aip09g01283 558 SUPERFAMILY TPR-like 256 450 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01283 Aip-Chr9 21241086 21247911 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01283 - - gmx:100800231 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01283 09 21241086 21247911 Aip09g01283 09 21241086 21247911 ECH
Aip06g00680 06 9039057 9041690 Aip09g01283 09 21241086 21247911 PCT