Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00680 ATGGCAGTCACTTCTCCCTCTCTTACCGCTACAGAAAAGAAGCACTGGTGGCTCACCAACCGGAAGATTGTTGACAAGTACATAAAGGACGCAAGGAGTCTCATTGCGACGCAAGAACAGAGCGAGATCGCCTCGGCGCTGAACCTTCTAGACGCTGCTCTGGCGATATCACCGAGGCTGGACCATGCACTCCACCTGAGAGCACGGTGCTTGCTGTACCTGCGGCGGTACAAGGATGTCGCCGATATGCTTCAGGACTACATTCCCAGCTTGAAGATCGCCAGTGATGCTGATTCAAGTTCTGTTTCCTCTTCTTCCTCTGATGGGTCTTCCAGGGAAGGAGTGAAGCTTCTGTCCCCTGAGGAAGCCGTGAGGGACCAAACCTTCAAGTGCTTCTCCGTTTCCGATCTGAAGAAGAAGGTCATGGCTGGACTCTGTAAAACCTGCGACAAGGAAGGGCAATGGAGGTACTTGGTTTTGGGTCAAGCGTGCTGCCACTTAGGCCTAATGGAGGACGCAATGGCCCTCCTCCAGACCGGAAAACGCCTCGCCACCGACGCATTCCGACGAGAGAGCGTCTGCTGGTCTGATGACAGCTTCTCCCTATCCAGCATTCCCTTCTCCGCCGACTCAAACACCACAAACCCGCCTCCTCCACCTGCCACGCCACCCCGCACCCCGCTCACCGACGCCGAGCACATTTCCCAGCTCCTCAGCCACATCAAATTCCTCCTGCGGCGGCGTGCGGCGGCCCTTGCAGCTCTTGATGCGGGTCTCCACTCGGAGGCCATTCGGCATTTCTCCAAGATTCTAGATGGTCGCAGGGCTGCACCTCAGGCCTTCCTGGCAGAATGCTACATGCATAGAGCCTCCGCCTACCGCGCTGCCGGCCGCATTGCGGAGTCCATAGCGGACTGCAATCGCACCCTTGCCCTTGATCCTACCTGCATTCCAGCCCTTGACACCAGAGCTTCCCTCTTCGAAGCAATTCGCTGCCTCCCGGATTCTCTCCACGACCTCGAACACCTTAAACTTTTGTACAATTCAATTCTCAGGGACCGGAAGCTTCCTGGCCCTGCGTGGAAGCGGCGCAATGTGAGGTACAGGGAAATTCCAGGGAAGCTCTGCGCCCTTGCCGTGAAGATTCAAGAGCTGAAGCAGAGGCTGGCTTCAGGGGAGACTGGGAATAATGTAGATTACTATGCTCTGATTGGTGTGAGGCGCGGTTGTTCAAGATCTGAGTTGGAGAGGGCTCATGTGTTGCTCACTCTAAAGCATAAACCCGACAAGGCTACCGGATTCATCGAAAGGTGCGAGCTGGCCGACGACCGAGACCTTGATTCCATCAAGGAGAAGGCCAGGATGTCAGCTTTGTTGCTGTATAGGTTGGTTCAGAAAGGTTACACAAATTTGATGAGTGCCGTCTTAGATGAAGAGGCTGCTGAGAAGCAGAGGAAGAAGCAAGCTGCATTGCATGCAGCTGCACAGGCACACGCGCACGCACACACGCAAGTTATGGTGCAACAGAAACCCAAGGACCCTGCTCCTGAATTGAACAATAATAGTATTGAGGTAGATAATTTGGTCACTGATAATATCAGCAGCAATGATTCAATGGAGAGTAACAATAACAAGTCTACAATATCATCATCTACTGTGAATCCTGCAGTTTTTCAAGGTGTTTTCTGCCGCGACCTGGCGGCAGTTGGGACCTTGCTTTCGCAGGTCGGATTCAATAGGCCAATTCCGGTGAAGTATGAAGCATTGAGCTGCTAA 1776 0.5355 MAVTSPSLTATEKKHWWLTNRKIVDKYIKDARSLIATQEQSEIASALNLLDAALAISPRLDHALHLRARCLLYLRRYKDVADMLQDYIPSLKIASDADSSSVSSSSSDGSSREGVKLLSPEEAVRDQTFKCFSVSDLKKKVMAGLCKTCDKEGQWRYLVLGQACCHLGLMEDAMALLQTGKRLATDAFRRESVCWSDDSFSLSSIPFSADSNTTNPPPPPATPPRTPLTDAEHISQLLSHIKFLLRRRAAALAALDAGLHSEAIRHFSKILDGRRAAPQAFLAECYMHRASAYRAAGRIAESIADCNRTLALDPTCIPALDTRASLFEAIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRRNVRYREIPGKLCALAVKIQELKQRLASGETGNNVDYYALIGVRRGCSRSELERAHVLLTLKHKPDKATGFIERCELADDRDLDSIKEKARMSALLLYRLVQKGYTNLMSAVLDEEAAEKQRKKQAALHAAAQAHAHAHTQVMVQQKPKDPAPELNNNSIEVDNLVTDNISSNDSMESNNNKSTISSSTVNPAVFQGVFCRDLAAVGTLLSQVGFNRPIPVKYEALSC 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00680 591 MobiDBLite consensus disorder prediction 97 116 - -
Aip06g00680 591 SUPERFAMILY TPR-like 38 329 IPR011990 GO:0005515
Aip06g00680 591 Gene3D Tetratricopeptide repeat domain 35 192 IPR011990 GO:0005515
Aip06g00680 591 SUPERFAMILY Chaperone J-domain 395 433 IPR036869 -
Aip06g00680 591 SMART tpr_5 283 316 IPR019734 GO:0005515
Aip06g00680 591 CDD DnaJ 399 433 IPR001623 -
Aip06g00680 591 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 591 - -
Aip06g00680 591 MobiDBLite consensus disorder prediction 212 226 - -
Aip06g00680 591 MobiDBLite consensus disorder prediction 206 226 - -
Aip06g00680 591 Gene3D DnaJ domain 382 503 IPR036869 -
Aip06g00680 591 PANTHER - 1 591 - -
Aip06g00680 591 Gene3D Tetratricopeptide repeat domain 231 356 IPR011990 GO:0005515
Aip06g00680 591 MobiDBLite consensus disorder prediction 97 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00680 Aip-Chr6 9039057 9041690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00680 - - gmx:100808420 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00680 06 9039057 9041690 Aip06g00680 06 9039057 9041690 ECH
Aip06g00680 06 9039057 9041690 Aip09g01283 09 21241086 21247911 PCT