Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01161 ATGAATTTGCAACAAGTGGGGCAATCTAAATCATCTAATGGATATGGTCGTCGGAAGTATGAAAAAGGAGCAACTAAGTCTGACAGTAAAATCTCATCTGGAAAATCAAATACCAGCGGTGTAGCTGAAGTGACTGGCAGTAAAAGTGGTACTTATGAGAGTCCGTCACGTGATCGGCTAGTGTATGTAACATCATCTCTTCTTGGGCACCATGTAGAAGTCCAGGTGAAAAATGGATCTATATACTCTGGAATATTTCATGCAACAAATACTGAGAAAGATTTTGGAATAATTTTAAAAGTGGCTCGCCTGATAAAGGATAGCTCTTTGCAAGGGCAAAGATCCAGTGTAGAAATTGTCAGCAAGGCTACTACTAAGACTTTAATTATACCTTCCAAAGAGCTTGTACAAGTCATAGCGAAGGATGTTGCTGTTACTAGGGATGGCCAGCCTAGTGAATCTCATTATGCTATGCATCAGGATATAATGGTTGATTCAGTTATATCTCAATCTCGCCATGTCGAGATGGGGAGAGAATTACAACGATGGGTACCTGATGATGATGATCCACAATGCCCTGAACTGGAAAATATCTTTGATGGCCCTTGGAATAGGGGATGGGATCAGTTTGAAACAAATAAAACGTTGTTTGGTGTAAATAGCACATTCAATGAAGACCTCTACACAACAAAACTTGAAAAAGGGCCTCAGATGAAAGAGCTGGAACAAAAAGCTTCAAGAATAGCAAAAGAAATTGAAGGGGAGGATACCCATGATCTTCATCTGGCAGAGGAAAGAGGCCGTTATCATGATGATTTTGATAGTGATGAAGAAACCAGATTCTCTTCAGTATATAGGGGTAAAGGTGTTGATGATAGTGGATATGATGAAGATGAGGAATCAAGGTTGGATTCATACAATTCTGAAACATTTGGCAGCATCACAGGTTCGGTCATTAAGAAGCCGGGTGAAACAAGTGGTGGAAAAGCCAACAATGGAGCACAAACTTGGTCAAACTTCTCTAAAATGGATCACTCACAGTCATCTCTGTCAAATATTGGTGTGGATTTAGGCCGCTCTGGTGCTGATGATCATGCTAAGCAATTAGCATCTGAACACCCTACTCAAAATTACTCATTTCAAGATGGGGAATGCAGGATTCAGAACTGTGTTAGTGATCCAAATGAAACCAGTGGTAATGCCACAGAAGAAAATCAGGTACAAGCTGAGGATGTCCGCCTGTCAAAATCTGAGGATTTACAGCCACCACATAACTTGAAGAATGTCGTCTCTGTCTCTGATAAGGGGGAATCATCACCTAACACCACCTCCTTTACCCCTTCACCACATATTATATCAAAGGGTCTTGAAAAAACTGGGTTATGTGGGGAGTTTACTACTGGGACTTCAGCATCTGGCAGATCTAGTGAGCAAACAAAAGCTGCAAATTCACGTGGAAGAGTAGGTAGTGCCTCATCATCTGGTTCAGATAATGTGGGCGGTGTGGCCGCATCTTCTGGTTCTGGTCTATCTCCGAGTTCTTCAGTTGGATCATTGTCTTCTGAAAGATCTATTTTGAATCCCCATGCCAAGGAATTCAAGCTTAATCCTAATGCCAAGAGTTTTATTCCGTCCCAAAATCCTGTTAGGTCCCGATCCCCAGTCTCTGATGGTTCCTTCTATTTCCCAGCTAATGTATCTACGGTACCAAATATGCCCGCGATGCCCATGGGTATTGGAGTTGGTAATACTTTTGCTGGGCCACCACAGCCTATGATATATAATCCGCAGGTAGCACAAATGCCATCCCAAGCATATTTTCATCCAAATGGACCACAGTATGGACAGCTTCTTGGTCATCCTAGGCAGGTTTTGTACATGCCAAGCTACCTACCTGAAACGCCGTATAAGGGACGAGATTATTGA 1926 0.4216 MNLQQVGQSKSSNGYGRRKYEKGATKSDSKISSGKSNTSGVAEVTGSKSGTYESPSRDRLVYVTSSLLGHHVEVQVKNGSIYSGIFHATNTEKDFGIILKVARLIKDSSLQGQRSSVEIVSKATTKTLIIPSKELVQVIAKDVAVTRDGQPSESHYAMHQDIMVDSVISQSRHVEMGRELQRWVPDDDDPQCPELENIFDGPWNRGWDQFETNKTLFGVNSTFNEDLYTTKLEKGPQMKELEQKASRIAKEIEGEDTHDLHLAEERGRYHDDFDSDEETRFSSVYRGKGVDDSGYDEDEESRLDSYNSETFGSITGSVIKKPGETSGGKANNGAQTWSNFSKMDHSQSSLSNIGVDLGRSGADDHAKQLASEHPTQNYSFQDGECRIQNCVSDPNETSGNATEENQVQAEDVRLSKSEDLQPPHNLKNVVSVSDKGESSPNTTSFTPSPHIISKGLEKTGLCGEFTTGTSASGRSSEQTKAANSRGRVGSASSSGSDNVGGVAASSGSGLSPSSSVGSLSSERSILNPHAKEFKLNPNAKSFIPSQNPVRSRSPVSDGSFYFPANVSTVPNMPAMPMGIGVGNTFAGPPQPMIYNPQVAQMPSQAYFHPNGPQYGQLLGHPRQVLYMPSYLPETPYKGRDY 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01161 641 MobiDBLite consensus disorder prediction 328 348 - -
Aip09g01161 641 Pfam LsmAD domain 217 286 IPR009604 -
Aip09g01161 641 MobiDBLite consensus disorder prediction 463 522 - -
Aip09g01161 641 MobiDBLite consensus disorder prediction 255 348 - -
Aip09g01161 641 SMART LsmAD_2 217 287 IPR009604 -
Aip09g01161 641 MobiDBLite consensus disorder prediction 1 55 - -
Aip09g01161 641 MobiDBLite consensus disorder prediction 390 522 - -
Aip09g01161 641 MobiDBLite consensus disorder prediction 421 450 - -
Aip09g01161 641 Pfam Ataxin 2 SM domain 57 141 IPR025852 -
Aip09g01161 641 MobiDBLite consensus disorder prediction 390 408 - -
Aip09g01161 641 MobiDBLite consensus disorder prediction 29 55 - -
Aip09g01161 641 MobiDBLite consensus disorder prediction 255 305 - -
Aip09g01161 641 PANTHER ATAXIN-2 HOMOLOG 4 632 - -
Aip09g01161 641 MobiDBLite consensus disorder prediction 361 380 - -
Aip09g01161 641 PANTHER ATAXIN 2-RELATED 4 632 IPR045117 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01161 Aip-Chr9 17400604 17410081 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01161 - - gmx:100778053 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01161 09 17400604 17410081 Aip09g01161 09 17400604 17410081 ECH
Aip08g00292 08 2181228 2187724 Aip09g01161 09 17400604 17410081 PCT