Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00797 ATGCAGCAAGTACCTAATAAACTGCAAAGAGAGGACAAGAAGCAAGATCTCATCATAATAATGAGGCTTGCTCTTACTATAAGAGCATCATCCTCTTCTTTTTCCATATCCAACCCCATTATCACTTTGTCACAAGATGAATCAAACACACCAACGTTACCTTTCAACCATTGTACCACACACTCATGGTCTCAACTTAAACCTACCTCATCAGCCAACTACATGTCCCCAAAACTTGGTCCCAAATGGAAGCAATACCAAGGAATCAACCACTGGCAAGACTTGCTTGATCCCCTTGATGATAACCTACGTTGGGAAATATTAAGATATGGACACTTTGTAGATGCAGCCTATCGTTCTTTTGACTTTGACCCTTCTTCTCCGACTTATGCCACGTGTCGTCATCCCAAAAGCTCGCTCTTAAATCGATGTGGAATTGCGAGCTCAGGATACAAATTAACTAAGAATTTACGCGCCACGTGTGGGATTCACGTGCCAACATGGGCAGATAAAATATCTAGTTGGGCATGTAGCCGGTCTAGTTGGATCGGTTACATAGCCGTATGTGAACACAAAAAGGAAATTATCCGGCTCGGCCGACGTGACGTGGTGATCGCATTTCGAGGAACGGCTACGTGCTTGGAGTGGCTGGAAAACCTACGTGCAACGTTAACTAACTTGGCTGATCAAGTGGACGGAAAAGACGATATTGGCCCTATGGTGCAAAAAGGGTTTCTAAGTCTGTACACGTCAAAAACCTCCAAGCAAGCAAGTTTGCAAGAGATGGTAAGAGAAGAGATTGGGAGAGTAATCAAATCCTATGGTAATGAACCACTTAGCCTCACCCTCACAGGTCATAGCCTTGGAGCCGCGCTTGCAATCCTAAGTGCGTATGATATAACCACCACCTTTGAGAATCCACCAATGGTGACGGTTGTTTCCTTCGGTGGGCCCCGCGTGGGAAACAGAAGATTTAGGAGAATATTGGAACAGAATGGGATCAAGATACTGAGAATAGTGAACCCTGACGATGTTTTCACAAGAGTTCCAGGGTTTGCTGTGAGTAAAGACAATGACGTGGCGGACAATGAAGATGTCCACGTGGCAAGATTGTTAGGGTGGTTACATAGGCGTGTAGAGGACATGCAGTTGGTTTATGCTGATGTTGGACAAGAGCTAAGGTTGAGTAGTAAGGATTTACCATATTTAAAGCAAGGAGATGTTGCCACGTGTCATGATCTGAAGACATACCTGCACTTGGTAAAAAGTTTTGTAAGCTCCTCGTGCGGCCCTTGCACACAGAAAACAATCAACGACATGTGGCCAAAGGCTTGGCTGTAA 1341 0.4482 MQQVPNKLQREDKKQDLIIIMRLALTIRASSSSFSISNPIITLSQDESNTPTLPFNHCTTHSWSQLKPTSSANYMSPKLGPKWKQYQGINHWQDLLDPLDDNLRWEILRYGHFVDAAYRSFDFDPSSPTYATCRHPKSSLLNRCGIASSGYKLTKNLRATCGIHVPTWADKISSWACSRSSWIGYIAVCEHKKEIIRLGRRDVVIAFRGTATCLEWLENLRATLTNLADQVDGKDDIGPMVQKGFLSLYTSKTSKQASLQEMVREEIGRVIKSYGNEPLSLTLTGHSLGAALAILSAYDITTTFENPPMVTVVSFGGPRVGNRRFRRILEQNGIKILRIVNPDDVFTRVPGFAVSKDNDVADNEDVHVARLLGWLHRRVEDMQLVYADVGQELRLSSKDLPYLKQGDVATCHDLKTYLHLVKSFVSSSCGPCTQKTINDMWPKAWL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00797 446 CDD Lipase_3 144 352 - -
Aip09g00797 446 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 59 430 - -
Aip09g00797 446 Gene3D alpha/beta hydrolase 82 441 IPR029058 -
Aip09g00797 446 Pfam Lipase (class 3) 204 352 IPR002921 GO:0006629
Aip09g00797 446 SUPERFAMILY alpha/beta-Hydrolases 150 395 IPR029058 -
Aip09g00797 446 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 59 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00797 Aip-Chr9 10270891 10272231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00797 14 429 Acyl Lipid Metabolism Gene Families AT2G44810 55.711 2.38e-166 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00797 K16818 - gmx:106798329 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00797 09 10270891 10272231 Aip09g00797 09 10270891 10272231 ECH
Aip09g00797 09 10270891 10272231 Aip04g03150 04 125191057 125192262 PCT