Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03150 ATGATCAATTTAGAAGACCACAATAGTTTCTCTTCGTCATCATTTGAATCAACACCATCAACATCTTCATTTGGCATTGGAACTTATCAAAATAAACTTGGTAAGAGATGGAAGGAGTACCAAGGAATGAGCAATTGGGAGGGTTTGTTAGACCCGTTAGATGATAACCTACGTGCTGAAATCCTACGGTACGGTCACTTCGTTGAAGCTGCATACAAGTCCTTTGACTTTGATCCTTCTTCTCCAAACTATGCCAACTGTAGATTCCCAAAGACAACACTTTTTGAGCGTTGCGGTTTACCAAACACAGGGTACAAGGTAACCAAATACCTCCGTGCAACTTCCGGCATTCAGTTACCGAACTGGGTCGACAAAGCACCGAGTTGGGTGGCAACACAATCAAGCTACGTTGGTTATGTCGCAGTTTGTGACAACAAAGAAGAGATCAAAAGACTTGGTCGGCGTGACGTTGTTATTGCTTTTAGAGGAACAACCACATGTTTGGAATGGCTAGAGAATTTGCGTGCCACACTCACCAACCTACCATGCAATCCCATGGACGGAAAAACTATGGGGTGTCATGGTAGTGGGGCCATGGTGGAAAGTGGTTTCTTGAGTCTCTACTCTTCTTCCATCCCCGACAACCCTTCCACCCTCAGTTTGCAGCAGATGGTCAAACAAGAGATTGTCAGGATTCTCCAAGCTTATGCTGGAGAACCCTTAAGTTTGACCATCACTGGCCACAGTCTAGGGGCGGCATTAGCTACGCTGGCGGCATATGATATAAATACCTCCTTTCCCAGACTGCCCATGGTGACGGTCATTTCTTTTGGTGGGCCTCGAGTTGGCGACCGGAGGTTCCGACGACAGTTGGAGAAGCAGGGGACAAAGGTTTTGCGAATAGTAAACTCCGAGGATGTTATCACCAAGGTTCCGGGTTTCGTGTTTGATGATGACATGGCAAAAGAAGGAGGTATCCATGTGGCAGGATTGCCGAGTTGGATACAGAAGAGGGTGGAGGAAGCGCAGTGGGTGTATGCTGAAGTTGGAAAGGAGTTGCGCCTATGTAGCAAGAATTCTCCGTATCTCGGTAGCACAAATGTTGCTACGTGTCACGAGTTGAACACATACTTACACCTTGTTGATGGGTTTGTGAGTTCCACGTGTCCCTTTAGGGCCACTGCAAAAAGATTTCTCCAGCGGTGA 1206 0.4685 MINLEDHNSFSSSSFESTPSTSSFGIGTYQNKLGKRWKEYQGMSNWEGLLDPLDDNLRAEILRYGHFVEAAYKSFDFDPSSPNYANCRFPKTTLFERCGLPNTGYKVTKYLRATSGIQLPNWVDKAPSWVATQSSYVGYVAVCDNKEEIKRLGRRDVVIAFRGTTTCLEWLENLRATLTNLPCNPMDGKTMGCHGSGAMVESGFLSLYSSSIPDNPSTLSLQQMVKQEIVRILQAYAGEPLSLTITGHSLGAALATLAAYDINTSFPRLPMVTVISFGGPRVGDRRFRRQLEKQGTKVLRIVNSEDVITKVPGFVFDDDMAKEGGIHVAGLPSWIQKRVEEAQWVYAEVGKELRLCSKNSPYLGSTNVATCHELNTYLHLVDGFVSSTCPFRATAKRFLQR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03150 401 CDD Lipase_3 106 320 - -
Aip04g03150 401 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 25 400 - -
Aip04g03150 401 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 25 400 - -
Aip04g03150 401 SUPERFAMILY alpha/beta-Hydrolases 59 357 IPR029058 -
Aip04g03150 401 MobiDBLite consensus disorder prediction 1 22 - -
Aip04g03150 401 Gene3D alpha/beta hydrolase 36 400 IPR029058 -
Aip04g03150 401 Pfam Lipase (class 3) 158 314 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03150 Aip-Chr4 125191057 125192262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03150 16 401 Acyl Lipid Metabolism Gene Families AT2G44810 68.912 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03150 K16818 - gmx:100800549 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03150 04 125191057 125192262 Aip04g03150 04 125191057 125192262 ECH
Aip09g00797 09 10270891 10272231 Aip04g03150 04 125191057 125192262 PCT