Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00792 ATGGCGACGGCCAACCCTTTCGATTTGTTAGGTGACGACGCCGAGGACCCCTCGCAGCAACTCGCCGCCGCGGAAGCTATGGCTGCTGCGGTGGCTCCACCCAAGAAGGGTTCAGCTTCGGCGGCGGCTCAGCAGCAGAAGCCGCCAGCTCAGTTGCCTTCTAAGCCTGTTCCTCCTTCTCAGGCTGTGAGGGATGCAAAAAATGAATCATCACGTGGTGGTCGTGGTGGTGGAGGTGGAAGAGGAGCAGGTGGACGAGGATATGGACGTGGTCGTGGGGGCCCTGGATTTAACCGTGACTCTCCAAGCGATGATACCTCATTCCCTGCTGCTGGAGGCCCTGCAAACCAAGTTGCCTTTGAAGGAGATGATGGGAGGCCTTCAGAAAGGCGTGGCTATGGCGTTGGGAGGCCTTATCGTGTTGGTGGTCGTCGTGGAGGTTTCAGCAATGGCGAAGCTGGCGAAGAAGGGCGTCCACGGAGACTTGAACGCCGCAGTGGGACAGGCCGCGGCAATGAACTTAAACGTGAAGGCTCTGGGCGTGGTAACTGGGGAACCCCTGCTGATGAAATTGCTCCGGTGACTGAGGAGGGAGTGAATGAAACTGAAAAGATTGTGGGTGAGGAGAACCCTGCTGGCGAGGGAGCTGCAGAAGATGCAAACAAGGACAATCCTGCCAATGAAGCTGTAGAAAAGGAGCCGGAGGAGAAGGAGATGACATTGGAGGAATATGAGAAGGTGCTGGAAGAGAAACGGAAGGCATTACAAGCGCTCAAAACTGAGGAGAGAAAGGTGGATATTAAGGAATTTGAATCCATGCAGCCACTGTCAAGCAAGAAAGACAACCATGACATCTTCATTAAGTTGGGATCGGACAAGGATAAGCGCAAAGATGCTTTGGAGAAGGAGGAGAAATCCAAGAAGTCTGTCAGCATCAATGAGTTTCTGAAGCCTGCCGAAGGAGAAAGGTACTACAACCCAGGCGGACGTGCCAGACGTGGCCAAGGTTCTAGAGGTTATGGTGGAAATGCTGGCAGCAACACCCAAGCCCCGTCGATTGCAGATCCTGGGCACTTCCCAACCTTGGGTGGCAAGTGA 1098 0.5446 MATANPFDLLGDDAEDPSQQLAAAEAMAAAVAPPKKGSASAAAQQQKPPAQLPSKPVPPSQAVRDAKNESSRGGRGGGGGRGAGGRGYGRGRGGPGFNRDSPSDDTSFPAAGGPANQVAFEGDDGRPSERRGYGVGRPYRVGGRRGGFSNGEAGEEGRPRRLERRSGTGRGNELKREGSGRGNWGTPADEIAPVTEEGVNETEKIVGEENPAGEGAAEDANKDNPANEAVEKEPEEKEMTLEEYEKVLEEKRKALQALKTEERKVDIKEFESMQPLSSKKDNHDIFIKLGSDKDKRKDALEKEEKSKKSVSINEFLKPAEGERYYNPGGRARRGQGSRGYGGNAGSNTQAPSIADPGHFPTLGGK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00792 365 MobiDBLite consensus disorder prediction 1 239 - -
Aip09g00792 365 Pfam Hyaluronan / mRNA binding family 160 265 IPR006861 -
Aip09g00792 365 MobiDBLite consensus disorder prediction 224 239 - -
Aip09g00792 365 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 365 - -
Aip09g00792 365 MobiDBLite consensus disorder prediction 154 177 - -
Aip09g00792 365 Coils Coil 241 264 - -
Aip09g00792 365 MobiDBLite consensus disorder prediction 289 311 - -
Aip09g00792 365 SMART HABP4_PAI_RBP1_2 158 266 IPR006861 -
Aip09g00792 365 MobiDBLite consensus disorder prediction 289 365 - -
Aip09g00792 365 MobiDBLite consensus disorder prediction 340 354 - -
Aip09g00792 365 Gene3D - 156 269 - -
Aip09g00792 365 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 365 IPR039764 GO:0003723
Aip09g00792 365 Pfam Stm1 1 77 IPR019084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00792 Aip-Chr9 10135718 10139653 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00792 K13199 - gmx:100807657 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00792 09 10135718 10139653 Aip09g00792 09 10135718 10139653 ECH
Aip09g00792 09 10135718 10139653 Aip04g03147 04 125123703 125127267 PCT