Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03147 ATGACTACCATGAACCCCTTTGATTTGTTGAAAGATGATACTGAGGATCCTTCTCAGCTCATCGCCAACGAGCAGCTCAAGGCTGCTGCTGCTGCCGCCACCGCCGTTCCGCCCAAGAAAGGGGCGGCGGCGGCTCCGCAGAAAGGAGGGCAGCAAAATAAGCCAGCTCAGCTCCCTACCAAGCCTACTCCTCCTGGTCAAGCTGTGAGGGAGGCAAAAAATGAGGCTTCTCGCGGAGGCCGTGGAGGTGGACGAGGTGGTGGGCGTGGAGGTGGACGGGGTCGTGGTTTTAACCGTGACTTTTCAAATGATGAGGGCTCATTCCCAGCCTCTGGAGCCCCTGCTACTCAAAGTGGTTTTGAGGAAGGAGATGGTGGGAGGACCTCAGATAGACGAGGCGGTTATGGTGGGCGAGGCCCTTACCGTGGTGGTCGCCGGGGAGAGTTCAGCAATGGGGAAGCTGGAGAAGAAGGAAGGCCAAGAAGAACATATGAACGCCGCAGTGGGACTGGACGCGGAAATGAGTTTAAGCGTGAAGGTGCTGGACGAGGAAACTGGGGAACACAGTCTGATGAAATTGCTCAGGTAACTGATGAAGTCGTGAATGAAGCTGAAAAGAATTTGGGCGAGGAGAAGCCTGCTGGTGAAGATGTGGCTGATGTAAACAAGGAGAGTCTTGCTGAAGAAGCTGAACAAAAAGAGCCTGAGGATAAGGAGATGACTCTGGAGGAGTATCAGAAAGTGCTGGAAGAGAAAAGAAAGGCCCTTCAAGCAGTAAAGACCGAGGAGAGAAAGGTTGATATCAAAGAATTTGCATCCATGCAGCCCCTATCAAACAAGAAAGACAACAATGACATCTTCATTAAATTGGGATCTGATAAGGATAGGCGCAAAGAAGCATTGGAGAGGGAGGAGAGATCCAAGAAGGCTGTAAGCATTAACGAGTTTCTGAAGCCAGCTGATGGGGAAGTCTACTATCGTGGGCGTGGCCCCCGCCCCCGTGGTCCAAAGGGTAGCTACCGTGGCAACTCCAACAATGCACAAGCTCCCTCCATTGAAGACCCTGGTCATTTCCCAACTTTGGGTGGCAACTGA 1095 0.5251 MTTMNPFDLLKDDTEDPSQLIANEQLKAAAAAATAVPPKKGAAAAPQKGGQQNKPAQLPTKPTPPGQAVREAKNEASRGGRGGGRGGGRGGGRGRGFNRDFSNDEGSFPASGAPATQSGFEEGDGGRTSDRRGGYGGRGPYRGGRRGEFSNGEAGEEGRPRRTYERRSGTGRGNEFKREGAGRGNWGTQSDEIAQVTDEVVNEAEKNLGEEKPAGEDVADVNKESLAEEAEQKEPEDKEMTLEEYQKVLEEKRKALQAVKTEERKVDIKEFASMQPLSNKKDNNDIFIKLGSDKDRRKEALEREERSKKAVSINEFLKPADGEVYYRGRGPRPRGPKGSYRGNSNNAQAPSIEDPGHFPTLGGN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03147 364 MobiDBLite consensus disorder prediction 203 240 - -
Aip04g03147 364 MobiDBLite consensus disorder prediction 149 179 - -
Aip04g03147 364 Pfam Hyaluronan / mRNA binding family 160 266 IPR006861 -
Aip04g03147 364 Gene3D - 158 270 - -
Aip04g03147 364 Pfam Stm1 1 83 IPR019084 -
Aip04g03147 364 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 363 IPR039764 GO:0003723
Aip04g03147 364 Coils Coil 242 265 - -
Aip04g03147 364 MobiDBLite consensus disorder prediction 320 364 - -
Aip04g03147 364 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 363 - -
Aip04g03147 364 MobiDBLite consensus disorder prediction 28 240 - -
Aip04g03147 364 SMART HABP4_PAI_RBP1_2 160 267 IPR006861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03147 Aip-Chr4 125123703 125127267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03147 K13199 - gmx:100814825 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03147 04 125123703 125127267 Aip04g03147 04 125123703 125127267 ECH
Aip09g00792 09 10135718 10139653 Aip04g03147 04 125123703 125127267 PCT