Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00643 ATGGCTTCAATTGGTGCAGTCAAAATCTTCTTCTTCTCCTACGCTTTCTGCCTCTTCAACTTTCTACCTCCTTCTCAAGGAAAACAAGAGAAATTGAATGCATATAGGTACCCGTTTATAAGAAAAGCAAGCACATTCCCATCATCAACACCATCAATCTCAGCACCAACAAACAACAATGGGTATGACTACATAATAATCGGTGGTGGAACAGCAGGGTGTCCTTTAGCAACAACATTGTCACAGAAGTTCAGTGTTCTGTTGCTGGAAAGAGGGGGTGTTCCATTCACAAACCCAAATGTGTCATTCTTAGAAAACTTCCACATTACATTGGCAGACACGTCAGCAACCTCAGCTTCACAATACTTCAAGTCAGAGGATGGTGTTTTGAATGCAAGGGCAAGGGTTTTGGGTGGTGGAAGCTCTATCAATGCTGGATTCTACACTAGAGCTAGCTCAAGGTTTATAGAGAAAGTTGGGTGGGATCCAAAGCTAGTGAATGAATCATATCCATGGATTGAGAAGCAAATAGTTCACAGGCCAACGTTTTCATCATATCAAAGAGCAGTGAGGGACAGCCTCTTAGATTCAGGGGTGTCACCATTCAATGGATTCACATATGATCATATATATGGAACTAAGCTTGGTGGAACCATTTTTGATAGATTTGGACGCCGTCACACTGCTGCTGAATTGCTTGCTTCTGCCAACCCTCAAAAACTTACTGTTTTGATATATGCAACTGTCCAAAAAATTGTTTTTGATACAAAAGGAAAAAGACCAAAAGCAGTAGGTGTAATATTCGAAGATGAAAATGGGAAACGGCATGAAGCAATAATTGGAAATGATAAAGAAAGCGAAGTGATAGTATCAAGTGGTGCAATTGGTACACCTCAATTGCTAATGCTAAGTGGAATTGGACCAAAACCAGAGCTAGAGAAATTGAACATCTCAGTTGTACATGACAACCCTTTTGTTGGTAAAGGAATGGTTGATAATCCAATGAACACAATCTTTGTTCCTTCAAACAGGGAAGTTCATCAGTCACTCATTGAAACTGTTGGTATTACCAAGTTGGGTGTTTATATTGAGGCTAGCAGTGGGTTTAGTCAGTCCCCAAATAGCATTCATTGGCACCATGGCATTGTCTCACCTGAGATTGGACAACTCTCTACAATCCCTCCAAAGCAAAGATCACAAGAAGCAGTTCAAGCCTTTATCAAGAACAAGAAAGACATACCAGTTGAAGCATTCAGAGGAGGTTTCATATTATCAAAGGTTGCAAATCCTTGGTCAGTAGGTGACCTCAAATTGGTCAACACAAATGTCAATGACAACCCTTCTGTCACCTTCAACTACTTCAGCCACCCCTACGATCTCCATCGCTGCGTCGAAGGGATCAAGCTTGCTACAAAGGTAGTTCAGTCTCAACACTTCACAAACTACACTCTGTGTAACAGAGAAACTACAGAGAAACTTCTTAACCTCAGTGTTAAGGCCAGTGTTAACCTTGTACCAAGACATGCCAATGATACTAAGTCTTTGGAGCAGTTTTGCAAAGATACTGTGATCACAATTTGGCACTACCATGGTGGTTGCCATGTTGGGAAGGTTGTTAGTTCTGATCATAAGGTTCTTGGTGTTGATAAGCTGAGAGTGGTTGATGGATCAACATTTGATGAGTCTCCAGGAACAAATCCTCAAGCTACTGTTATGATGATGGGCAGGTACATGGGATTGAAGATTTTGAGAGATAGGTTGGGGAAATTGGCTTGA 1776 0.4122 MASIGAVKIFFFSYAFCLFNFLPPSQGKQEKLNAYRYPFIRKASTFPSSTPSISAPTNNNGYDYIIIGGGTAGCPLATTLSQKFSVLLLERGGVPFTNPNVSFLENFHITLADTSATSASQYFKSEDGVLNARARVLGGGSSINAGFYTRASSRFIEKVGWDPKLVNESYPWIEKQIVHRPTFSSYQRAVRDSLLDSGVSPFNGFTYDHIYGTKLGGTIFDRFGRRHTAAELLASANPQKLTVLIYATVQKIVFDTKGKRPKAVGVIFEDENGKRHEAIIGNDKESEVIVSSGAIGTPQLLMLSGIGPKPELEKLNISVVHDNPFVGKGMVDNPMNTIFVPSNREVHQSLIETVGITKLGVYIEASSGFSQSPNSIHWHHGIVSPEIGQLSTIPPKQRSQEAVQAFIKNKKDIPVEAFRGGFILSKVANPWSVGDLKLVNTNVNDNPSVTFNYFSHPYDLHRCVEGIKLATKVVQSQHFTNYTLCNRETTEKLLNLSVKASVNLVPRHANDTKSLEQFCKDTVITIWHYHGGCHVGKVVSSDHKVLGVDKLRVVDGSTFDESPGTNPQATVMMMGRYMGLKILRDRLGKLA 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00643 591 PIRSF Alcohol_oxidase 38 590 IPR012132 GO:0050660
Aip09g00643 591 ProSitePatterns GMC oxidoreductases signature 1. 134 157 IPR000172 GO:0016614|GO:0050660
Aip09g00643 591 Gene3D - 62 575 IPR036188 -
Aip09g00643 591 PANTHER OSJNBA0019K04.7 PROTEIN 2 590 - -
Aip09g00643 591 SUPERFAMILY FAD-linked reductases, C-terminal domain 330 532 - -
Aip09g00643 591 ProSitePatterns GMC oxidoreductases signature 2. 293 307 IPR000172 GO:0016614|GO:0050660
Aip09g00643 591 Pfam GMC oxidoreductase 430 576 IPR007867 GO:0016614
Aip09g00643 591 SUPERFAMILY FAD/NAD(P)-binding domain 54 585 IPR036188 -
Aip09g00643 591 Pfam GMC oxidoreductase 225 334 IPR000172 GO:0016614|GO:0050660
Aip09g00643 591 Pfam GMC oxidoreductase 62 156 IPR000172 GO:0016614|GO:0050660
Aip09g00643 591 Gene3D - 179 525 - -
Aip09g00643 591 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00643 Aip-Chr9 7543515 7551775 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00643 62 586 Miscellaneous Gene Families AT5G51950 52.919 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00643 K15403 - gmx:100788704 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00643 09 7543515 7551775 Aip09g00643 09 7543515 7551775 ECH
Aip08g00244 08 1771153 1776023 Aip09g00643 09 7543515 7551775 PCT