Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00244 ATGGCTTCACTACTACTTAGTGCTTCTGTCAGATCATTTTTCCTCTTCTTCTTCCTCCTTCCACTGTGTCTCTTCAACTTTCTACCTCTCTCTCAAGGTAACGATAAGGAATGGAACCATGGATATGAATTCATAAGGAAGGCGAGCTCATTCTCATCGTCGCCGGCGGAATCAAGCAGTAGCAGCAGCAGCAATGGCTACGATTACATAATAGTGGGGGGAGGAACGGCAGGGTGTCCTCTCGCAGCAACGCTATCGGAGAAGTTCAGTGTGTTGGTGTTGGAGAGAGGGGGAGTCCCTTTCACGAACCCTAATGTGTCGTTTCTTGAGAACTTCCACATCACACTGGCGGACACCTCACCAACCTCAGCATCCCAATGCTTCATCTCAACCGATGGTGTTCTGAATTCAAGGGCTAGGATTCTTGGTGGTGGTTCCTCCATTAATGCTGGCTTCTACACTCGAGCCAGTTCAAGATTCATAGAGAAGGTGGGGTGGGATTCTAAGCTGGTAAATGAATCATATCCATGGGTTGAGAAGCAGATTGTTCATCGTCCAACATTTTCAGCTTGGCAGAGAGCAGCCAGAGACAGCCTCCTAGATGTTGGTGTCTCACCTTTCAATGGATTCACTTATGATCATAAATATGGAACCAAGGTTGGTGGCACAATCTTCGACAGATTCGGTCGCCGCCACACTGCCGCCGAACTTCTTGCTACCGGCAACCCTGATAAACTTACTGTTTTGGTATATGCCACTGTTCAAAAGATTGTTTTTGATACAAGAGGAACAAGGCCTAAGGCTGTGGGGGTTATTTTCAAGGATGAAAAGGGGCAACAGCATCATGCAATTCTAAACAATGATGGGCAGAGTGAAGTGATTGTGTCTAGTGGTGCAATTGGGACTCCTCAAATGCTATTGCTCAGTGGAATTGGCCCAAAAGAAGATCTTCAGAAGTTGAACATCCCTGTTGTTCTTGACAACCATTTTGTTGGGAAGGGCATGGCTGATAACCCCATGAACACAATCTTTGTCCCTTCTAAGAGACCAGTTAAACAATCACTCATTGAAACTGTTGGTATCACCAATTTGGGTGTCTACATTGAAACTAGCTGTGGTTTTGGTCAATCCAATGACAGCATTCACTGCCATCATGGCATTGTCTCAGCCGAGATTGGGCAACTCTCCACAATTCCCCCCAAACAAAGATCAATAGAAGCTGTTCAAGCTTACTTGAAGAGCAAGAAAGATATACCAGTTGAGGCATTCAGGGGAGGTTTCATTTTGTCAAAAGTTGCCAATCCTTGGTCAACAGGAGAGCTCAAGTTAGTTAACACCAATGTGGAGGACAACCCTTCTGTGACCTTCAACTACTTCAGCCACCCATATGATGTTCATCGCTGCGTCGAGGGGATTCGCTTGGCAACCAAGGTTGTCCAATCTCAGCACTTCACAAACTTTACCATGTGTGATAGACAGACAACAGAGAAACTGCTTAACCTCACTGTGAAGGCTAATGTCAACCTCATACCAAAACATGTCAATGACACACAGTCACTAGAGCAGTTTTGTAGAGACACTGTGATCACAATTTGGCACTACCATGGTGGCTGCCATGTAGGGAAGGTAGTCAATCCTGATTATAAGGTTCTTGGTGTTGATAGACTCCGCGTCGTCGACGGCTCAGTATTTCCAGAGTCACCAGGAACTAATCCTCAAGCTACTGTGATGATGATGGGAAGGTACATGGGACTGAAGATTTTACAAGACAGGTTGGGGAAATTTGATGGTATATAA 1797 0.4552 MASLLLSASVRSFFLFFFLLPLCLFNFLPLSQGNDKEWNHGYEFIRKASSFSSSPAESSSSSSSNGYDYIIVGGGTAGCPLAATLSEKFSVLVLERGGVPFTNPNVSFLENFHITLADTSPTSASQCFISTDGVLNSRARILGGGSSINAGFYTRASSRFIEKVGWDSKLVNESYPWVEKQIVHRPTFSAWQRAARDSLLDVGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTAAELLATGNPDKLTVLVYATVQKIVFDTRGTRPKAVGVIFKDEKGQQHHAILNNDGQSEVIVSSGAIGTPQMLLLSGIGPKEDLQKLNIPVVLDNHFVGKGMADNPMNTIFVPSKRPVKQSLIETVGITNLGVYIETSCGFGQSNDSIHCHHGIVSAEIGQLSTIPPKQRSIEAVQAYLKSKKDIPVEAFRGGFILSKVANPWSTGELKLVNTNVEDNPSVTFNYFSHPYDVHRCVEGIRLATKVVQSQHFTNFTMCDRQTTEKLLNLTVKANVNLIPKHVNDTQSLEQFCRDTVITIWHYHGGCHVGKVVNPDYKVLGVDRLRVVDGSVFPESPGTNPQATVMMMGRYMGLKILQDRLGKFDGI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00244 598 SUPERFAMILY FAD-linked reductases, C-terminal domain 335 537 - -
Aip08g00244 598 Pfam GMC oxidoreductase 435 581 IPR007867 GO:0016614
Aip08g00244 598 ProSitePatterns GMC oxidoreductases signature 2. 298 312 IPR000172 GO:0016614|GO:0050660
Aip08g00244 598 ProSitePatterns GMC oxidoreductases signature 1. 139 162 IPR000172 GO:0016614|GO:0050660
Aip08g00244 598 PANTHER OSJNBA0019K04.7 PROTEIN 15 598 - -
Aip08g00244 598 SUPERFAMILY FAD/NAD(P)-binding domain 64 590 IPR036188 -
Aip08g00244 598 Gene3D - 67 580 IPR036188 -
Aip08g00244 598 Pfam GMC oxidoreductase 67 339 IPR000172 GO:0016614|GO:0050660
Aip08g00244 598 PIRSF Alcohol_oxidase 43 596 IPR012132 GO:0050660
Aip08g00244 598 Gene3D - 184 530 - -
Aip08g00244 598 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 15 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00244 Aip-Chr8 1771153 1776023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00244 67 591 Miscellaneous Gene Families AT5G51950 52.075 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00244 K15403 - gmx:100784433 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00244 08 1771153 1776023 Aip09g00643 09 7543515 7551775 PCT