Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00639 ATGGCTAATAATCATTGCTGTTCAACTCAACTTATTGATGGAGATGGTACATTCAATGTAGCTGGGATTGAAACTTTCATGAAGGAGGTGAAATTTAGTGAATGTGGGCTTTCGTACGCTGTAGTTTCTATTATGGGTCCACAAAGTAGTGGCAAGAGCACGCTGTTAAACAATTTGTTTCGTACCAATTTCCGTGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTTCTGGGATAGAGCCTTGTACCATTTTTTGGTTTTCTATTGTCACCTTCTATACTGAATTTTATTTTATTATTTTATTTCAGGATGATACTGCATTTGAAAAGCAGAGTGCTTTATTTGCTCTTGCTGTCTCAGATATAGTGTTAATCAACATGTGGTGTCATGACATTGGCCGTGAGCAAGCTGCTAATAAGCCACTCTTGAAAACTGTCTTTCAGGTTATGATGAGATTGTTTAGCCCACGCAAAACGACATTGTTGTTTGTCATACGTGACAAAACGCGGACACCACTTGAAAATTTAGAACCTGTCTTGCGAGAAGATATTCAGAAGATATGGGACTCGGTTCCTAAACCACAAGCCCACAAGGAAACCCCACTTAGTGAATTTTTTAATGTTGAAGTTACTGCTCTTTCTAGTTATGAAGAAAAAGAAGAGCAATTCAAGGAGCAGGTTGCCAACTTGAGGCAACGATTCCAGCACTCCATCGCTCCTGGTGGGCTTGCAGGGGACAGGCGAGGAGTAGTTCCTGCATCGGGCTTTTCTTTTAGTGCTCAGCAAATCTGGAAAGTCATCAAGGAGAACAAGGACCTTGACCTTCCTGCACATAAGGTAATGGTTGCCACTGTCCGATGTGAAGAAATTGCCAACGAGAAATATGCCACTTTTTCTGCAAATGAGGAATGGTGCCAATTAGAAGAAGCCGTACAATCAGGCCCTGTTCAGGGGTTTGGAAAAAAACTCAATTCACTCCTAGGTGCTTGTTTGTCAGAGTATGATCTTGAAGCCACTTATTTTGATGAAGGTGTGAGATCTTCAAAACAAAAACAACTCCAAGAAAAATTGTTGCAACTTGTCCAACCATCGTTCCTTTCTGCGCTGGGACATATAAGATCTGGAATAGTGGATAAATTCAAGGATGTATTTGACAAGGCTTTGAATAGAGGTGAAGGGTTTTCTTTGGCTGCCAAAAACTGCATTGAGTCTTCTATGGCTCAATTTGATGAAGCTTCCGCAGATGTTGTAATTGAACTAGCAGACTGGGATACATCTAAAGTAAGGGAGAAACTGCGGCGTGACATTGATGCACATGTGGCATCTGTACGTGATGCTAAGCTTTCTGAACTGACTTCATCGTATGAGGAAAAACTTAAAGAAGCCTTGTCTGGACCTGTTGAAGCTCTTTTGGATGAAGCAAGTGGTGATACTTGGTCATCGATAAAGAAACTTCTTAGGCGTGAGACTGAATCAGCTGTCTCAGGGTTCTCTGCTGCGCTTGCTGGGTTTGATATGGATGAAGATACGAGACAGAAAATGATTTCGAATATAGCAGATTATGCTAGGGGTGTAGTAGAAGGAAAGGCTAGGGATGAAGCTGGAAGAGTTCTAATCCGGATGAAGGATAGCAGGTTTACAATGTTGTTTAGCCACGACGCTGATTCAATGCCTCGTGTTTGGACGGGCAAAGAAGATATCCGTACCATCACAAAGACTGCTCGCTCTGCTTCTTTGAAGTTACTGTCTGTCATGGCTGTTATTCGTTTGGATGATGGTGATACTGATAATATTGAGAAAACATTAGCAGTTGCATTGATAGATTCATCAAGCAGTAATGTTACTGATAGGAGCATCACAACGGTTGATCCGCTAGCTTCTAGCACATGGGAAAAGGTACCATCCTCTAAGACATTGATTACACCTGTCCAATGCAAATCCTTGTGGAGGCAATTCAAGACAGAGACAGAATACAGTGAGGCCAACAAGCGTAATAACAACTGGTTACCTCCTCCATGGGCAATACTTGCTTTGATTATTCTCGGATTTAATGAATTTATGACACTCTTAAGAAATCCGTTGTATTTGCTTGTCATCTTTATTGGTTATCTTCTCATCAAAGCCCTATGGGTGCAACTGGACATTACGGGTGAATTTCGCCATGGAGCTCTGCCGGGACTCTTATCCTTGTCTACCAAATTCGTTCCAACTGTCATGAACCTTATGAAAAAACTAGCAGACGAGGGTGCAGATAACAATACTCGCAGAAATCCACCAAAAGGCGATTACAAGGCTGCTAATGATGGTAGTGCTGCATCTTCCAGTTCTTCATCAAATGTAACTGTGCTTGACAACGGAACCAAACACAACAGAACTGAATACTCCAGTTCATCAAAATTCGAGTAG 2433 0.4172 MANNHCCSTQLIDGDGTFNVAGIETFMKEVKFSECGLSYAVVSIMGPQSSGKSTLLNNLFRTNFREMDAFKGRSQTTKGIWMARCSGIEPCTIFWFSIVTFYTEFYFIILFQDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVTALSSYEEKEEQFKEQVANLRQRFQHSIAPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYATFSANEEWCQLEEAVQSGPVQGFGKKLNSLLGACLSEYDLEATYFDEGVRSSKQKQLQEKLLQLVQPSFLSALGHIRSGIVDKFKDVFDKALNRGEGFSLAAKNCIESSMAQFDEASADVVIELADWDTSKVREKLRRDIDAHVASVRDAKLSELTSSYEEKLKEALSGPVEALLDEASGDTWSSIKKLLRRETESAVSGFSAALAGFDMDEDTRQKMISNIADYARGVVEGKARDEAGRVLIRMKDSRFTMLFSHDADSMPRVWTGKEDIRTITKTARSASLKLLSVMAVIRLDDGDTDNIEKTLAVALIDSSSSNVTDRSITTVDPLASSTWEKVPSSKTLITPVQCKSLWRQFKTETEYSEANKRNNNWLPPPWAILALIILGFNEFMTLLRNPLYLLVIFIGYLLIKALWVQLDITGEFRHGALPGLLSLSTKFVPTVMNLMKKLADEGADNNTRRNPPKGDYKAANDGSAASSSSSSNVTVLDNGTKHNRTEYSSSSKFE 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00639 810 MobiDBLite consensus disorder prediction 755 810 - -
Aip09g00639 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 281 IPR027417 -
Aip09g00639 810 Gene3D - 17 249 IPR027417 -
Aip09g00639 810 PANTHER PROTEIN SEY1 6 785 IPR008803 -
Aip09g00639 810 Coils Coil 222 242 - -
Aip09g00639 810 MobiDBLite consensus disorder prediction 757 771 - -
Aip09g00639 810 Hamap Protein SEY1 [SEY1]. 8 766 IPR008803 -
Aip09g00639 810 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 45 285 - -
Aip09g00639 810 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 36 256 IPR030386 GO:0005525
Aip09g00639 810 CDD GBP 35 246 - -
Aip09g00639 810 Pfam Sey1 three-helix bundle domain 327 757 IPR046758 -
Aip09g00639 810 MobiDBLite consensus disorder prediction 777 810 - -
Aip09g00639 810 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 6 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00639 Aip-Chr9 7491631 7499654 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00639 K22698 - gmx:100780006 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00639 09 7491631 7499654 Aip09g00639 09 7491631 7499654 ECH
Aip08g00242 08 1747644 1754401 Aip09g00639 09 7491631 7499654 PCT