Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00242 ATGGACTTAGAGGGCACAGATGGAAGAGAAAGGGGAGAGGACGATACTGCATTTGAAAAGCAGAGTTCTCTTTTTGCTTTGGCTGTTTCGGATATTGTGCTGATAAACATGTGGTGTCATGACATCGGCCGTGAGCAAGCTGCAAACAAGCCACTCCTAAAAACTGTGTTTCAGGTCATGATGAGGTTGTTTAGTCCACGCAAAACAACATTGATGTTTGTCATACGTGATAAAACAAGGACACCACTAGAAAATTTAGAACCTGTCTTACGAGAAGATATTCAGAAGATTTGGGATTCTGTTCCTAAGCCACAGGCCCACAAGGAAACCCCACTGAGTGAATTTTTTAATGTTGAAGTTGTTGCTCTTTCTAGCTTCGAAGAGAAGGAAGAGCAATTTAAGGAGCAGGTTCATGAGTTGAGGCAGCGATTTGTTCATTCCATAAATCCTGGTGGGCTTGCGGGGGATCGGCGTGGAGTTGTTCCTGCTTCGGGCTTTTCTTTTAGTGCTCAGCAAATCTGGAAAGTCATCAAGGAGAACAAAGATCTTGACCTTCCCGCACACAAGGTCATGGTAGCTACTGTAAGATGTGAAGAAATTGCCAATGAGAAATATGCCCTTTTTGCTGCCAATGAGGACTGGCGTCAGCTAGAAGAGGCTGTGCAATCAGGTCCAGTTGCTGGATTTGGGAAAAAGCTCAATTCGCTTCTTGATACTTGTCTTTCAGAGTATGATGTTGAAGCCACTTATTTTGATGAAGGTGTGAGAACCGCTAAACAGAAGCACCTTCAAGAAAAACTGCTGCAACTTGTCCAACCAGCATTCCACTCTGCCCTTGGACATATAAGGATTGGAACTTTCGATAAGTTCAAGGAAGCATTTGATAAGGCTTTGAATAAAGGGGAAGGGTTTTCTGAAGCTGCTAATAATTGCACAGGGATTTTTATGGCTCAGTTTGATGAAGCCTGTGCAGATGTTGTTATCGAAGTTGCAGACTGGGATACATCTAAAGTAAGGGAGAAACTACGACGTGACATTGATGCACATGTTGCATCTGTACGTGCAGCTAAGTTATCGGAACTTACTACAACATATGAGGAAAAACTAAAAGAAGCTTTGTCTGGACCTATTGAAGCACTTTTTGATGGAGCTAATAATGAAACTTGGCCATCAATAAGGAAACTCTATAAGCGTGAGACTGAATCAGCTGTTTCTGGGTTTTCTGCTGCGCTTACCAGGTTTGATGCAGATGAAGAAACACAAAAGAACATGATTGTGAGTTTAGAGAATTATGCAAGAGGTTTGATAGAGACAAAAGCTAGGGATGAAGCTTGCAGAGTCTTAATACGTATGAAGGAAAAGTTCACAACATTGTTTAGTCATGATGCTGAATCAATGCCGCGTATTTGGACAGGAAGCGAAGATATTCGATCCATCACCAAGACTGCTCGATATGCTTGCCTGAAGTTGCTATCTGTTATGACCGTAATTCGTTTGGATGATAAAGATGACACTCTTAACATTGAGAATATTTTAGCAAAAGCATTGCTAGATTCACCCAATGAAAAAGAGAAGAAAATCACAACAGTTGATCCACTGGCTTCAAGCACTTGGGAAAAGGTTCCAGCTTCTAAAACATTGATCACCCCTGTCCAGTGTAAATCTTTGTGGAGGCAATTCAAGATTGAGACAGAATATACTGTGTCTCAGGCCATTGCTGCACAGGAGGCCAACAAGCGTGGTAACAACTGGTTACCTCCACCATGGGCAATTGTTGCCTTGCTTATTCTGGGATTTAACGAGTTTATGACACTTCTAAGAAATCCTTTATACTTGATTCTCATTTTTATTGGTTATCTTCTCATTAAAGCCTTGTGGGTGCAACTTGACGTTGCGGGTGATTTTCGCCATGGTGCACTAGCTGGACTCTTATCCTTGTCTACCAAGTTTCTTCCAACTATAATGAATCTTATGAGAAAGTTAGCAGAGGAGGGGGTTCCTGAAACTAACAATCCTCAGCCAACTCCATCAACAAGTAATCAAACTACTGGTAGCTCTGTGTCATCTACTGCTTCATCTAAGGCAGTGCCAAATCTTATGTTGAGGTGTGATAGCAATCCAATGTTGGTTTGTGGCAATTCAATGCATTAG 2151 0.4179 MDLEGTDGRERGEDDTAFEKQSSLFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSFEEKEEQFKEQVHELRQRFVHSINPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYALFAANEDWRQLEEAVQSGPVAGFGKKLNSLLDTCLSEYDVEATYFDEGVRTAKQKHLQEKLLQLVQPAFHSALGHIRIGTFDKFKEAFDKALNKGEGFSEAANNCTGIFMAQFDEACADVVIEVADWDTSKVREKLRRDIDAHVASVRAAKLSELTTTYEEKLKEALSGPIEALFDGANNETWPSIRKLYKRETESAVSGFSAALTRFDADEETQKNMIVSLENYARGLIETKARDEACRVLIRMKEKFTTLFSHDAESMPRIWTGSEDIRSITKTARYACLKLLSVMTVIRLDDKDDTLNIENILAKALLDSPNEKEKKITTVDPLASSTWEKVPASKTLITPVQCKSLWRQFKIETEYTVSQAIAAQEANKRGNNWLPPPWAIVALLILGFNEFMTLLRNPLYLILIFIGYLLIKALWVQLDVAGDFRHGALAGLLSLSTKFLPTIMNLMRKLAEEGVPETNNPQPTPSTSNQTTGSSVSSTASSKAVPNLMLRCDSNPMLVCGNSMH 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00242 716 PANTHER PROTEIN SEY1 1 689 IPR008803 -
Aip08g00242 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 182 IPR027417 -
Aip08g00242 716 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 1 157 IPR030386 GO:0005525
Aip08g00242 716 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 1 689 - -
Aip08g00242 716 MobiDBLite consensus disorder prediction 668 693 - -
Aip08g00242 716 MobiDBLite consensus disorder prediction 664 693 - -
Aip08g00242 716 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 1 186 - -
Aip08g00242 716 Pfam Sey1 three-helix bundle domain 228 664 IPR046758 -
Aip08g00242 716 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00242 Aip-Chr8 1747644 1754401 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00242 K22698 - gmx:100777656 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00242 08 1747644 1754401 Aip09g00639 09 7491631 7499654 PCT