Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00539 ATGGCTTCCTTCACTTTGTTCCATCTCTTCATTGCCATCATCCTCCATGTCTTTCTTGCCGCAACACCCATCTTCTCAGTTTCAGAACAACTCTCATCATCAACAATCCCCACCAGGTTTCTCGATTTTGCCAAAAAGCCTGAAACTTTCGATTGGATGGTGAACATCAGAAGGAAGATTCACGAGTACCCAGAATTGCTATATGAGGAATTTAAGACCAGTGAGCTCATAAGAATAGAGTTGGATAAATTGGGAATTTCATATAAGCATCCAGTTGCTGGAACTGGTGTTATTGGATACATTGGAACTCGAAAACCTCCTTTTGTTGCTCTAAGAGCTGATATGGATGCTCTTCCTATGCAGGAAATGGTGGAATGGGAGCACAAGAGTAAAGTACCAGGGAAGATGCATGCTTGTGGTCATGATGCTCATGTTACTATGGTTCTTGGTGCTGCTAACATTCTCAAACAGCATGAAAAAGAGATACAAGGAACTGTTGTACTTGTTTTCCAACCAGCAGAGGAAGGAGGTGCAGGGGCTAAAAAGGTTATAGAAGCCGGAGCTTTAAAAGATGTAGGTGCTATCTTTGGATTGCATGTTGCCCCTAATATTCGTGTAGGCGAAGTAGGCTCAAGGTCTGGTACATTAATGGCAGCAAGTGGTTTCTTTGAAGCAACAATAAATGGAAAGGGGGGTCATGCAGCTATTCCTCAACATTCTATAGACCCTATTTTGGCAGCTTCTAATGTGATTGTTAGCTTACAACACCTTGTATCTCGTGAATCCGATCCTCTGGATTCCCAGGTTGTGACAGTTGCAAAATTCCAAGGAGGTGATGCATTCAATGTTATTCCAGATTCTGTCACAATTGGTGGCACCTTCCGAGCTTTCTCGAAAGAAAGTTTCTTGCAACTGAGACATCGCATTGAGCAGGTTATTGTAGCGCAGGCCGCAGTGCAGCGGTGCAACGCAACAGTGAACTTCCTAGAGGGAGAGAAACCTTTCTATCCTGCTACCATAAATGATGGGAAACTACACAAGCATTTTCAAACTGTGGCAGGGACTTTGCTGGGTGCAAGTAAAGTTATTGAGGTTCCACCAATGATGGGAGCTGAAGACTATTCGTTCTATCAAGAGGTTATACCTGGCTACTTCTTTTGGCTTGGAATGCAGAATGCATCAAATGAAAGGCTTCACTCGTTACATTCACCTTTTTTCACAGTCAATGAAGATGCACTTCCTTATGGTGCTGCACTTCATGCATCACTAGCTGCTACTTACCTTCTAAAACATCAGAATGTTGTGCCATTTGTAGAAGCCATGTATAATGATGAATTGTAA 1341 0.4273 MASFTLFHLFIAIILHVFLAATPIFSVSEQLSSSTIPTRFLDFAKKPETFDWMVNIRRKIHEYPELLYEEFKTSELIRIELDKLGISYKHPVAGTGVIGYIGTRKPPFVALRADMDALPMQEMVEWEHKSKVPGKMHACGHDAHVTMVLGAANILKQHEKEIQGTVVLVFQPAEEGGAGAKKVIEAGALKDVGAIFGLHVAPNIRVGEVGSRSGTLMAASGFFEATINGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRESDPLDSQVVTVAKFQGGDAFNVIPDSVTIGGTFRAFSKESFLQLRHRIEQVIVAQAAVQRCNATVNFLEGEKPFYPATINDGKLHKHFQTVAGTLLGASKVIEVPPMMGAEDYSFYQEVIPGYFFWLGMQNASNERLHSLHSPFFTVNEDALPYGAALHASLAATYLLKHQNVVPFVEAMYNDEL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00539 446 CDD M20_IAA_Hyd 53 428 IPR044757 GO:0009850|GO:0016787
Aip09g00539 446 PIRSF Amidohydrol_AmhX 41 432 IPR017439 GO:0016787
Aip09g00539 446 SUPERFAMILY Zn-dependent exopeptidases 48 430 - -
Aip09g00539 446 Pfam Peptidase family M20/M25/M40 110 424 IPR002933 GO:0016787
Aip09g00539 446 Pfam Peptidase dimerisation domain 223 317 IPR011650 -
Aip09g00539 446 PANTHER AUXIN CONJUGATE HYDROLASE 7 446 - -
Aip09g00539 446 SUPERFAMILY Bacterial exopeptidase dimerisation domain 218 337 IPR036264 -
Aip09g00539 446 PANTHER PEPTIDASE M20 FAMILY MEMBER 7 446 IPR017439 GO:0016787
Aip09g00539 446 TIGRFAM amidohydrolases: amidohydrolase 53 415 IPR017439 GO:0016787
Aip09g00539 446 Gene3D Zn peptidases 53 413 - -
Aip09g00539 446 Gene3D - 218 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00539 Aip-Chr9 5895655 5898944 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00539 K21604 K14664 gmx:100789077 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00217 08 1548523 1551865 Aip09g00539 09 5895655 5898944 PCT