Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00217 ATGATGATGGGTTTGGTCAAATGGGTCAACTTGTTCATCATATTTCATTTGTTTGGTGCTGCAACAACAACAAAACCCATCATGGCAGCCTCAGATTCTTCCAAGTTTCTGAATTTGGCGAAGGAACCTTGGGTATTTGATTGGATGGTTGAGATCAGGAGGAAGATTCATGAGAATCCAGAACTGGGGTATGAGGAATTTAAGACAAGTGAGCTTGTAAGGACCGAATTGGACAAGCTTGGGATCCCATACAAATACCCAGTTGCGGTAACAGGTGTTATTGCTTTCATAGGAACAAAAAAGCCTCCTTTTGTTGCAATTAGAGCTGACATGGATGCTCTCCCTATGCAGGAACTGGTGGAATGGGAGCACAAGAGTAAAGTGCAAGGCAAGATGCATGCATGTGGTCATGATGCTCATGTTGCTATGCTTCTTGGTGCTGCAAAGATCCTCAAAGAGCATGAAAAAGATATCCAAGGAACTGTAGTTCTTGTTTTTCAACCTGCAGAGGAAGGAGGTGGAGGGGCTAAGGAAATTTTAGATGCTGGAGCCTTAGAAAATGTTTCTGCCATATTTGGATTGCATGTCGCACCGAAGTTACCTATAGGCGTAGTGGCATCTAGATCTGGTTCTTTCTTTGCCGGAAGCGGCTTCTTTGAAGCAATAATAAGTGGCAAGGGAGGTCATGCAGCCATTCCTCAGCATTCTATAGACCCCATATTGGCAGCTTCTAATGTGATTGTTAGCTTACAACATATCATTTCTCGCGAGGCCGATCCTCTGGATTCCCAGGTTGTGACGGTAGCGAAATTCCAAGGAGGTGGTGCATTCAACGTTATTCCAGATTCTGTCACAATTGGTGGGACTTTCCGAGCTTTCTCAACAGGAAGTTTTATGCAACTGAGACAGCGGATTGAGCAGGTTATCACTAAGCAAGCTTCCGTGCAAAGGTGCAATGCAACGGTCAGCTTTCTCGACGACAAGCCTTTCTTCCCTCCAACTGTAAACCATGCAGAATTGCATGACTATTTCCAAAGTGTAGCCGGAAGCGTGCTCGGCGGCGATAAAGTGATTGACATACAACCATTGATGGGATCGGAGGACTTTTCGTTCTACCAACAGGTCATTCCCGGTTACTTCTTCCTCCTTGGAATGGAGAACACGGCGGTTGAACACCTCGAATCGCCGCACTCTCCCCATTTCAAAGTAAACGAAGATGCACTCCCTTATGGAGCTGCACTTCATGCTTCATTAGCTGCTAACTATCTTCTCAAAATTCATCAAGACTTGCCAGTGGTAAAGGAGAAACACCATGATGAATTATAA 1326 0.4495 MMMGLVKWVNLFIIFHLFGAATTTKPIMAASDSSKFLNLAKEPWVFDWMVEIRRKIHENPELGYEEFKTSELVRTELDKLGIPYKYPVAVTGVIAFIGTKKPPFVAIRADMDALPMQELVEWEHKSKVQGKMHACGHDAHVAMLLGAAKILKEHEKDIQGTVVLVFQPAEEGGGGAKEILDAGALENVSAIFGLHVAPKLPIGVVASRSGSFFAGSGFFEAIISGKGGHAAIPQHSIDPILAASNVIVSLQHIISREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTFRAFSTGSFMQLRQRIEQVITKQASVQRCNATVSFLDDKPFFPPTVNHAELHDYFQSVAGSVLGGDKVIDIQPLMGSEDFSFYQQVIPGYFFLLGMENTAVEHLESPHSPHFKVNEDALPYGAALHASLAANYLLKIHQDLPVVKEKHHDEL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00217 441 PANTHER PEPTIDASE M20 FAMILY MEMBER 3 441 IPR017439 GO:0016787
Aip08g00217 441 Gene3D - 214 331 - -
Aip08g00217 441 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 4 3 441 - -
Aip08g00217 441 CDD M20_IAA_Hyd 49 423 IPR044757 GO:0009850|GO:0016787
Aip08g00217 441 Pfam Peptidase dimerisation domain 215 313 IPR011650 -
Aip08g00217 441 SUPERFAMILY Zn-dependent exopeptidases 45 424 - -
Aip08g00217 441 Pfam Peptidase family M20/M25/M40 106 420 IPR002933 GO:0016787
Aip08g00217 441 Gene3D Zn peptidases 49 408 - -
Aip08g00217 441 PIRSF Amidohydrol_AmhX 34 426 IPR017439 GO:0016787
Aip08g00217 441 SUPERFAMILY Bacterial exopeptidase dimerisation domain 214 332 IPR036264 -
Aip08g00217 441 TIGRFAM amidohydrolases: amidohydrolase 49 410 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00217 Aip-Chr8 1548523 1551865 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00217 K21604 - gmx:100794121 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00217 08 1548523 1551865 Aip08g00217 08 1548523 1551865 ECH
Aip08g00217 08 1548523 1551865 Aip09g00539 09 5895655 5898944 PCT