Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00477 ATGGAGAACAGGACAATGAGAAGGACTTTTAGTAATATGATTGGAGATGAGAAGGGTATGAAACCTTTGATGCTGAAATGTGGTTTGGCTTTGGCACTTACATTTGGTGGATTTCTCTATTCTCACTTCAGAACCAAAAGAATCAAGTTTCCCTCTTCTATCCCTAAGTGCCTACATTCACGTTCGTTTCCCTCATTCTCTTTTTGTACTATATCTCTATCTAAACACAATGGAGACAAAGAGAAAGAGAAAGACGAGTCTATGTTACCTGAATCTGCAGAATTCGGATCCATCATCACTGCTGGAAGAATCTCTTTCAAGAAAGATGTGGAAGTTCCAGCAAGATCATCAGAAATTGCGTCTCCATCAACAGCGCATGGAAGCTGTTCCGAGAGGGACGATTATCACGAACAAGAGATCAAGCAACTGAGCAACGTCATCCGAGTCCTTCAAGAACGAGAAAGAACCCTAGAACTTCAATTGCACGAGTATTGCGGTATCAGAGAGCAAGAAACGGCGGTTATGGAGCTCCAGAACAGGTTGAAGATAAGTAACATGGAGACTCAGATGTTTAATTTGAAGCTCGAGACGTTGCAGTCGGAGAATCGGAGACTGGAGGCTCAGCTGGCGGATCATGCGAAAGCTCTCGGCGAGCTTGAGACGTCGAAGGCGAAGGTGAAGATGTTGAAGAAGAAATTAAGGTATGAAGCTGAACAGAATAAGGAGCAGATCATGAACCTTAAGCAGAAAGTTTCCAAGTTGCAAGATCAAGAATCCAAGTTGAATCGAGAGATTCAAGCCAAAATTGGAAGGCTAAAGGAACTTGAATCTGAGACTCAAGTGTTGAGGGAAGCTAATATGAGATTAGAAATGGAAAATTCTGAATTAGCTTCCAGATTGGAATCTACTCAGATGCTTGCACAAGCTGTTCTAGAAGACCCTGAGGCAGATGTCCATAGAAACGAAAACGAGCTCCTTCGAGAGAAGAACGAGAGCTTGTTGAAGGAAATAGAGCAGTTACAACATGATAGATGTTCAGATGTGGAGGAACTAGTTTACTTGAGATGGATAAATGCATGCTTAAGGCATGAACTAAGGCACTACCAACCGCCGGCGGGAAAAACGGTGGCGCGTGACTTAAGCAAAAGCTTAAGTCCTACGTCGGAGAAGAAAGCCAAGCAGCTTATACTTGAGTATGCAAACAGCATTGATGGACCAGGGAACCTTTCTTGTGCTGATTCCGAATCTTCTTCCCAGGCTTCTTATATGACGGACTCCGGCGAGCTTGACGAGTTATCGCCTCATAAAGAGAAAGATAAAGAAAAAGATATAGATCGACGCCGGCTCAGCCGAGCCACGTCAAGAGAAAAATCATTTAAATCTCTAGATGGTGGCACTATTTCTCCGAACTACGGCTTGGCTGGAGCCGACGGAATGAGAAGTGAGTATGCAACTCCGGGTAGAAATTCGTTGGACTTAGAAAGGACGACGAGTTTGAAGGAGGAAGGAGATAGGAGGAGTCGAGATTCCAAAGAGGAAGATAATGAATCTTTACAAGAATCTTCATCGGTTAATGAGAAATCTAACAATTTGGTTAAATATGCTGGAGCTTTGAAAGATTCTCCTGGAAATGCAAACGCAAATGCCATTGCCAATGCCGATCCAAAAAGGCTCATTGTACATAGAAGATCGGCAACATATAGTTCATTTTAA 1713 0.4302 MENRTMRRTFSNMIGDEKGMKPLMLKCGLALALTFGGFLYSHFRTKRIKFPSSIPKCLHSRSFPSFSFCTISLSKHNGDKEKEKDESMLPESAEFGSIITAGRISFKKDVEVPARSSEIASPSTAHGSCSERDDYHEQEIKQLSNVIRVLQERERTLELQLHEYCGIREQETAVMELQNRLKISNMETQMFNLKLETLQSENRRLEAQLADHAKALGELETSKAKVKMLKKKLRYEAEQNKEQIMNLKQKVSKLQDQESKLNREIQAKIGRLKELESETQVLREANMRLEMENSELASRLESTQMLAQAVLEDPEADVHRNENELLREKNESLLKEIEQLQHDRCSDVEELVYLRWINACLRHELRHYQPPAGKTVARDLSKSLSPTSEKKAKQLILEYANSIDGPGNLSCADSESSSQASYMTDSGELDELSPHKEKDKEKDIDRRRLSRATSREKSFKSLDGGTISPNYGLAGADGMRSEYATPGRNSLDLERTTSLKEEGDRRSRDSKEEDNESLQESSSVNEKSNNLVKYAGALKDSPGNANANAIANADPKRLIVHRRSATYSSF 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00477 570 MobiDBLite consensus disorder prediction 429 458 - -
Aip09g00477 570 Coils Coil 316 343 - -
Aip09g00477 570 Coils Coil 167 222 - -
Aip09g00477 570 MobiDBLite consensus disorder prediction 494 520 - -
Aip09g00477 570 MobiDBLite consensus disorder prediction 407 426 - -
Aip09g00477 570 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 13 570 - -
Aip09g00477 570 Coils Coil 140 160 - -
Aip09g00477 570 Gene3D - 181 309 - -
Aip09g00477 570 Coils Coil 230 295 - -
Aip09g00477 570 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 13 570 IPR040265 -
Aip09g00477 570 MobiDBLite consensus disorder prediction 407 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00477 Aip-Chr9 5051094 5055617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00477 - - ahf:112709977 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00477 09 5051094 5055617 Aip09g00477 09 5051094 5055617 ECH
Aip08g00207 08 1437263 1440110 Aip09g00477 09 5051094 5055617 PCT