Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00207 ATGAGAGAAGAGAAGGGGCCAAAGCCTTTCATAGTGAAATTAGGCTTGGCTTTAGCTCTTTCATTTGCTGGATTCATCTACTCTCACCTCAGAGCTAAAAGAGTCAAACCCAGCAATAATACTTCCCCTACTCAGGGTCCTCCTTCAGGTCAAGGGAGTCACACTAATATGGGAGAAGGCATAGGAGCAGCACTAGGTCCTGTTTCAGAAGGAAATTATTCACATAGTGAAGATACATGCATCAACAGGGTGATCTGTAACAATTCAACCATAGGTATCTCTCATAGCAGTAAACAAAATGGAGATAAGAATGAGTTACTCCTTCCTGAATTTCAGAATCTTGTGAAAGAAGTAGAATTTGGAGCCACCCTTGAGAGAAAGTCTTCAGAGAAAGATGTAGAAGCAACAGCATGTGTAAGTCATGAGAAGGATGACCATGAAAAAGAGGTAACAGAACTCAAAAACATAATTTCAATGCTTCAAGAAAGGGAGCATAGTCTTGAGGTTCAACTTCTTGAGTGCTGTGGTCTTAGAGAGCAAGAAAAAGCAGTGAAGGAACTGCAAAATAGATTGAAGATAAGTAATATGGAGGCAAAGATGTTCAGTCTAAAGGTTCAGACCTTACAATCAGAGAATCATAGATTACAGGAACAGGTGGCTAATCATGCAAAAGTGGTAGCTGAGCTTGAGGCCACAAAAGCCAAAGTTGAACTATTGCAGAAGAAACTTAAGCATGAAACTGAACATAATAGGGAGCAGATCATAATTCTTCAACATAGAGTTTCCAAATTGCAAGAACAAGAACAAGAATGCAAAGCTGTTGATTGTGATCATGATATTCAATTAAAGCTGCAAAAGCTGAAGGATCTTGAGTCTGAAGTAGAAGTGTTGAGGCAATCTAATTTCAGATTGCAGCTGGAAAATTCTGAATTAGCTCAAAGATTGGATTCTACACAGATCCTTGCAAATGCTGTTCTGGAAGAACCAGAGGGGGATACTCGGAAGGAAGATATCGAACGCCTTAGACAAGAGAACGAGAGGTTGATGAAGGAAATGGAACAACTACAAGCTGATAGGTGTTCAGATGTTGAAGAATTAGTGTATCTGAGATGGATAAATGCTTGTTTAAGATATGAACTAAGGAACTACCAACCCCAACCTGGTAAGACAGTTGCAAAGGATTTAAGTAGAAGCTTAAGTCCTACATCTGAGAAGAAGGCCAAGAAGCTTATACTTGAATATGCAAATACCAATGAAGGGAACATTGTGGATTTTGATTTAGACCAGTGGTTCTCCTCCCAAGGTTCTTCTCTTACAGATTCTGGAGAGTATGATGACTCTTCTTCCATGGATAATTCATCTACTGCCAGAACTAACACCACTGGAAAGACCAAAATCTTTAGCAAGCTTAGGAGAATCTTACATGGCAAAGATAGTCATGATCACCACCATAGTCAGGTTTCATCACAAGCAAATTCTGGAGCTCAGAGCCGAAGAAGCGAGTTTACAACTCCCACTGTCACATCTAGAGCTTCCTTTGATTTATCTGTATTGACTAGGATGAAGCAAAGAGATAGGAGAAACTCAGATAGCTTTGTCCTGGGAGGCTCAAGTAAAATCAGTCCAAGGGGTGAAGCTTCTGATTTGGAGAAATATGCAAAAGCTTTAGAAGATTCTAGCGCAAGCGCTCGACACCAAAGGCGCAGAAGAGCAACATCATATAGTTAG 1728 0.4022 MREEKGPKPFIVKLGLALALSFAGFIYSHLRAKRVKPSNNTSPTQGPPSGQGSHTNMGEGIGAALGPVSEGNYSHSEDTCINRVICNNSTIGISHSSKQNGDKNELLLPEFQNLVKEVEFGATLERKSSEKDVEATACVSHEKDDHEKEVTELKNIISMLQEREHSLEVQLLECCGLREQEKAVKELQNRLKISNMEAKMFSLKVQTLQSENHRLQEQVANHAKVVAELEATKAKVELLQKKLKHETEHNREQIIILQHRVSKLQEQEQECKAVDCDHDIQLKLQKLKDLESEVEVLRQSNFRLQLENSELAQRLDSTQILANAVLEEPEGDTRKEDIERLRQENERLMKEMEQLQADRCSDVEELVYLRWINACLRYELRNYQPQPGKTVAKDLSRSLSPTSEKKAKKLILEYANTNEGNIVDFDLDQWFSSQGSSLTDSGEYDDSSSMDNSSTARTNTTGKTKIFSKLRRILHGKDSHDHHHSQVSSQANSGAQSRRSEFTTPTVTSRASFDLSVLTRMKQRDRRNSDSFVLGGSSKISPRGEASDLEKYAKALEDSSASARHQRRRRATSYS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00207 575 MobiDBLite consensus disorder prediction 556 575 - -
Aip08g00207 575 MobiDBLite consensus disorder prediction 486 507 - -
Aip08g00207 575 MobiDBLite consensus disorder prediction 36 69 - -
Aip08g00207 575 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 2 571 IPR040265 -
Aip08g00207 575 MobiDBLite consensus disorder prediction 438 462 - -
Aip08g00207 575 Coils Coil 143 163 - -
Aip08g00207 575 MobiDBLite consensus disorder prediction 524 547 - -
Aip08g00207 575 PANTHER ACTIN BINDING PROTEIN FAMILY 2 571 - -
Aip08g00207 575 MobiDBLite consensus disorder prediction 476 507 - -
Aip08g00207 575 Coils Coil 177 249 - -
Aip08g00207 575 Coils Coil 331 358 - -
Aip08g00207 575 Coils Coil 280 307 - -
Aip08g00207 575 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00207 Aip-Chr8 1437263 1440110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00207 - - gmx:100796238 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00207 08 1437263 1440110 Aip08g00207 08 1437263 1440110 ECH
Aip08g00207 08 1437263 1440110 Aip09g00477 09 5051094 5055617 PCT