Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00458 ATGGAAAGTTTCGCCGGTGGCGGTGTTAAGGACGTGTACGGCGAGGATAGAGCCACAGAGGATCAGTTTGTGACACCATGGAGTGTTTCTGTTGCTAGTGGGTATACATTGTTGCGAGATCCTCACTTCAATAAAGGATTGGCATTCACTGAACAAGAAAGGGATGCACATTACTTGCGTGGTCTTCTTCCTCCATCAGTTATTTCTCAAGAAACTCAGGTGAAGAGACTCATTCAACTAATACGGCAGTATCAAGTACCATTGCTGAAGTATGTGGCAATGATGGATCTTCAGGAGAGCAATGAAAGGTTGTTTTATAGGCTTCTTATTGATCATGTTGAGGAGTTACTTCCTGTTGTCTACACTCCAACAGTTGGTGAAGCTTGCCAGAAATATGGCAGCATCTTCTCAAATCCTCAAGGTCTTTTTATAAGCTTGAAAGAGAAAGGGAGGATTCTTGAAGTTCTAAGGAATTGGCCTGAGATGAACATTCAAGTCATAGTTGTAACTGATGGAGAAAGGATCTTAGGTCTAGGGGACCTTGGCTGTCAGGGAATGGGAATACCAGTTGGGAAACTTTCTTTGTATACAGCACTTGGAGGAGTTCGTCCTTCTGCTTGCTTGCCTATTACCATTGATGTGGGTACAAACAATGAGAAGCTGTTGAATGATGAATTATACATTGGTCTAAGGCATAAAAGAGCAACTGGCAAGGAATATGATGAACTTCTGCATGAATTCATGACTGCAGTAAAACAAAATTATGGAGAAAAAATCCTTGTTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTACTTGAAAGATATAGGTCAACACATCTTGTTTTCAATGATGATATTCAGGGAACAGCGTCGGTGGTCCTCGCCGGACTTGTCGCGGCCCTGAAATTGGTCGGAGGAAACTTAGCTGATCACAAGTTCCTCTTCCTTGGGGCTGGAGAGGCTGGCACCGGAATTGCAGAACTCATAGCCCTTGAAATATCAAAACGGACAAATATTGAAGTGGAAAAAGCTCGCAAGAACATTTGGTTGGTGGATTCAAAGGGATTGATTGTTAGTTCCAGAAAGGAATCACTTCAACATTTCAAGAAGCCTTGGGCTCATGAACATGAACCTATATCGGATCTGGTCCAAGCAGTTAATCAAATTAAGCCAACAGTATTGATTGGAACATCAGGACAAGGCCAAACTTTCACTCAAGCAGTGGTTGAGGCTATGGCCTCCAATAATGAGAAACCTATTATCCTAGCTCTTTCCAACCCAACATCACAATCAGAATGTACTGCTGAACAAGCTTATAATTGGACTAAGGGACGTGTAATTTTTGCTAGTGGAAGCCCATTTGACCCGGTTGAAATTGATGGGAAGAAACATGTGCCTGGCCAGGCCAATAATGCATACATTTTTCCTGGATTCGGTCTTGGTTTGATAATGTCTGGAACAATCCGAGTTCATGATGACATGCTTCTAGCAGCTTCTGAGGCTTTGGCTTCACAAGTGAGCAAAGAGGACTATGAAAAGGGGCTTATATACCCTCCCTTCACTAACATTAGAAAGATTTCAGCAAATATAGCTGCAAATGTCGCTGCTAAGGCCTATGAGCTTGGCTTGGCCACTCGACTTCCTCAACCAAAAGATTTGGTGAAGTTTGCTGAGAGCTGTATGTATACTCCAACCTATAGAAGCTACAGATGA 1722 0.4251 MESFAGGGVKDVYGEDRATEDQFVTPWSVSVASGYTLLRDPHFNKGLAFTEQERDAHYLRGLLPPSVISQETQVKRLIQLIRQYQVPLLKYVAMMDLQESNERLFYRLLIDHVEELLPVVYTPTVGEACQKYGSIFSNPQGLFISLKEKGRILEVLRNWPEMNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLRHKRATGKEYDELLHEFMTAVKQNYGEKILVQFEDFANHNAFDLLERYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLADHKFLFLGAGEAGTGIAELIALEISKRTNIEVEKARKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPISDLVQAVNQIKPTVLIGTSGQGQTFTQAVVEAMASNNEKPIILALSNPTSQSECTAEQAYNWTKGRVIFASGSPFDPVEIDGKKHVPGQANNAYIFPGFGLGLIMSGTIRVHDDMLLAASEALASQVSKEDYEKGLIYPPFTNIRKISANIAANVAAKAYELGLATRLPQPKDLVKFAESCMYTPTYRSYR 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00458 573 PRINTS Malic enzyme signature 104 128 IPR001891 GO:0004470|GO:0004471
Aip09g00458 573 PRINTS Malic enzyme signature 164 193 IPR001891 GO:0004470|GO:0004471
Aip09g00458 573 PRINTS Malic enzyme signature 200 222 IPR001891 GO:0004470|GO:0004471
Aip09g00458 573 PRINTS Malic enzyme signature 260 278 IPR001891 GO:0004470|GO:0004471
Aip09g00458 573 PRINTS Malic enzyme signature 285 301 IPR001891 GO:0004470|GO:0004471
Aip09g00458 573 PRINTS Malic enzyme signature 316 332 IPR001891 GO:0004470|GO:0004471
Aip09g00458 573 PRINTS Malic enzyme signature 419 435 IPR001891 GO:0004470|GO:0004471
Aip09g00458 573 PIRSF ME 10 573 IPR001891 GO:0004470|GO:0004471
Aip09g00458 573 Pfam Malic enzyme, NAD binding domain 289 541 IPR012302 GO:0051287
Aip09g00458 573 PANTHER MALIC ENZYME-RELATED 6 573 - -
Aip09g00458 573 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 13 288 IPR046346 -
Aip09g00458 573 Gene3D - 32 286 IPR037062 GO:0004471
Aip09g00458 573 Pfam Malic enzyme, N-terminal domain 98 279 IPR012301 GO:0004471
Aip09g00458 573 Gene3D - 287 573 - -
Aip09g00458 573 SMART malic_2 98 279 IPR012301 GO:0004471
Aip09g00458 573 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 6 573 - -
Aip09g00458 573 ProSitePatterns Malic enzymes signature. 285 301 IPR015884 GO:0004471
Aip09g00458 573 CDD NAD_bind_1_malic_enz 289 567 - -
Aip09g00458 573 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 289 572 IPR036291 -
Aip09g00458 573 SMART Malic_M_2 289 542 IPR012302 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00458 Aip-Chr9 4799748 4807350 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00458 K00029 - gmx:100791514 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00458 09 4799748 4807350 Aip08g00191 08 1309896 1317655 ECH
Aip05g03292 05 138508999 138513962 Aip09g00458 09 4799748 4807350 ECH
Aip09g00458 09 4799748 4807350 Aip09g00458 09 4799748 4807350 ECH
Aip08g00191 08 1309896 1317655 Aip09g00458 09 4799748 4807350 PCT