Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00295 ATGGAACTTATTTCCGGTTTGCCTGAAGACTTGGCCCGAGACTGTTTGATTCGGGTCTCATACCAACAATTCCCAACGGTGGCATCGGTTTGCAAAAACTGGAAAGAGGAGGTTGAGTCGCCGGAGTTTCGCCGTCAACGCCGGCGCACCGGCATCTCACAGAAGCTCCTCGTGATGGTTCATGCACGATGTGACCCGGATAATGAACCCGGATCCGGTTCATCAAAGCGATTATATAACCCAGTTTACCGTCTCAGCGTGTTCGAACCGGTAACCGGTAACTGGAGCGAGTTGCCTGCCCCACCGGAGTTTGAATCCGGGCTACCCATGTTTTGTCGGGTCGCTAGCGTTGGGTCGGAGCTTATCCTATTGGGCGGGTTAGACCCAAATACATGGAAGGCTTCTGATTCCGTTTTGATTTATAACTTCATTACTGCGAAGTGGCGCCGGGGGACTCACATGCCTGGTGGGTCCCGCATGCTCTTTGCATGCGTGTCAGACTCGCGGCGAATGGTATTCGTCGCCGGTGGACACGACGACGAGAAAAATGCACTGCGATCCGCGCTGGCGTATGACGTGGCAGAGGATAAGTGGATATCCCTGCCCGACATGGCTGCGGAACGCGACGAGTGCACGGCCTTGTTCCGCCACGGGCGACTGGCTGTCGTCGGTGGTTATCGGACGGAAACGCAAGGTGTGTTTGAAAGGAGCGCGGAGGTTTTTGACGTTGCCACGTGGCAGTGGGGTCCAGTAATGGAGGAGTTTTTGGATTGCGCCACGTGTCCGAGAAACTCGACGGACGGTGGTGATGTGGACGGGAGAGTGATCATGTGTTGCGGCGAGGAGATAAAATCGAGGCAGGGTGGCACGTGGCAGAAGATGGGGAAGGTGCCGGTGGAGATACGGAACGTGGCGTACGTTGGAGCGTTGGATGGAGGGGCAGTGGTGATTGGATCCAACGGTCACGGAGAGGCGCATGAAAGTTTCGTGTTTGATTTGAAGAGTTGTAATTGGAGAAAGGTTGAAACCCCAGAAAAATTCAGGGGCCATGTCCAAACAGGTTGTGTTTTGGAGATTTAA 1080 0.5454 MELISGLPEDLARDCLIRVSYQQFPTVASVCKNWKEEVESPEFRRQRRRTGISQKLLVMVHARCDPDNEPGSGSSKRLYNPVYRLSVFEPVTGNWSELPAPPEFESGLPMFCRVASVGSELILLGGLDPNTWKASDSVLIYNFITAKWRRGTHMPGGSRMLFACVSDSRRMVFVAGGHDDEKNALRSALAYDVAEDKWISLPDMAAERDECTALFRHGRLAVVGGYRTETQGVFERSAEVFDVATWQWGPVMEEFLDCATCPRNSTDGGDVDGRVIMCCGEEIKSRQGGTWQKMGKVPVEIRNVAYVGALDGGAVVIGSNGHGEAHESFVFDLKSCNWRKVETPEKFRGHVQTGCVLEI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00295 359 SMART kelc_smart 120 169 IPR006652 GO:0005515
Aip09g00295 359 SMART kelc_smart 171 218 IPR006652 GO:0005515
Aip09g00295 359 Pfam Kelch motif 172 204 IPR006652 GO:0005515
Aip09g00295 359 Pfam Kelch motif 112 155 IPR006652 GO:0005515
Aip09g00295 359 SUPERFAMILY Kelch motif 80 343 IPR015915 GO:0005515
Aip09g00295 359 Pfam F-box domain 4 43 IPR001810 GO:0005515
Aip09g00295 359 PANTHER OS02G0208700 PROTEIN 1 359 IPR044595 GO:0080037|GO:2000762
Aip09g00295 359 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 359 - -
Aip09g00295 359 SUPERFAMILY F-box domain 3 50 IPR036047 GO:0005515
Aip09g00295 359 Gene3D - 27 356 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00295 Aip-Chr9 2894741 2896264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00295 7 198 Miscellaneous Gene Families AT4G33900 26.415 1.55e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00295 - - gmx:100796602 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00295 09 2894741 2896264 Aip09g00295 09 2894741 2896264 ECH
Aip08g00124 08 783879 785664 Aip09g00295 09 2894741 2896264 PCT