Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00124 ATGGAGCTTATTTCAGCTCTACCTGAGGACGTAGCCCGAGATTGCTTGATTCGGATCTCTTATCAAAACTTTCCAGCAGTTTCCTCTGTGTCCAAAGCCTGGAATACCGAGATCCAGTCGCCGGAGTTTCGCCGTAGAAGGACCGCCGCTAATCAAACTCAGAAAATACTCGTCGCCGTTCAATCCAGAGTTGACTCCGACGACAAACGTCGAACCGGCTTGCTGGTCAAGGCAGCAACGAACCCGGTTTACCAGCTCAGCGTGTTGGAACCCAAAACCGGTAACTGGAGCGAGTTACCACCGGCACCGGAATTACCAAACGGGTTACCCATGTTCTGTCGTATAGCCGGTGTAGGCTACGACCTTGTTGTTATTGGCGGGTGGGACCCAGAGTCTTGGAAAGCTTCCAATTCAGTTTTTATCTATAACTTTCTATCTGCCACGTGGCGACGTGGGGCCGACATGCCCGGTGGGCCCCGAACGTTCTTTGCGTGTGCATCGGATAACGATCGTACGGTCTACGTTGCTGGCGGCCACGACGACGAGAAGAATGCACTGAAATCCGTGTTGGCGTATGACGTGGCACGCGATGCATGGGCCGCTCTGCCTGATATGTCTAGAGAGCGTGACGAGTGCAAAGCCATCGTTCGGGGAGGACGCCTCTGCATAATTGGCGGCTACTGCACCGAAATGCAGGGCCGCTTTGAGAAGAGCTCAGAGGAGTTTGATGCTGCCACGTGTCAGTGGAGCCCAGTGGAAGAAGAGTTCTTGGATGCTGGCACCTGTCCTAGGACTTGCGTCGATGGCGGTGATGATGAGTTGTTCATTTGCCGAGACGGTGAGGTGGTGGTCTTAAAGCGTGACACGTGGCAGACGGTGGTAAAGGTGCCGGAGGAAATACGCAATGTTTCGTATATGGAAGCGCGGGAAGGAGCATTGTTGTTAATTGGATCAAGTGGTTTCGGACAACCACATATGGGTTTTTTGTTGGACTTGAAGAGTAGTAATTGGGCCAAATTATCGAGCCCAGAAAACTACACTGGCCATGTCCAATTTGGTTGCCTTTTGGAAATTTAG 1077 0.5218 MELISALPEDVARDCLIRISYQNFPAVSSVSKAWNTEIQSPEFRRRRTAANQTQKILVAVQSRVDSDDKRRTGLLVKAATNPVYQLSVLEPKTGNWSELPPAPELPNGLPMFCRIAGVGYDLVVIGGWDPESWKASNSVFIYNFLSATWRRGADMPGGPRTFFACASDNDRTVYVAGGHDDEKNALKSVLAYDVARDAWAALPDMSRERDECKAIVRGGRLCIIGGYCTEMQGRFEKSSEEFDAATCQWSPVEEEFLDAGTCPRTCVDGGDDELFICRDGEVVVLKRDTWQTVVKVPEEIRNVSYMEAREGALLLIGSSGFGQPHMGFLLDLKSSNWAKLSSPENYTGHVQFGCLLEI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00124 358 Gene3D - 9 295 IPR015915 GO:0005515
Aip08g00124 358 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 358 - -
Aip08g00124 358 SUPERFAMILY Kelch motif 81 339 IPR015915 GO:0005515
Aip08g00124 358 SMART kelc_smart 172 219 IPR006652 GO:0005515
Aip08g00124 358 SMART kelc_smart 121 169 IPR006652 GO:0005515
Aip08g00124 358 PANTHER OS02G0208700 PROTEIN 1 358 IPR044595 GO:0080037|GO:2000762
Aip08g00124 358 Pfam Kelch motif 115 156 IPR006652 GO:0005515
Aip08g00124 358 Pfam Kelch motif 160 206 IPR006652 GO:0005515
Aip08g00124 358 SUPERFAMILY F-box domain 3 53 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00124 Aip-Chr8 783879 785664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00124 4 217 EF-hand Containing Proteins AT4G39560 26.977 4.41e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00124 - - gmx:100817910 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00124 08 783879 785664 Aip08g00124 08 783879 785664 ECH
Aip08g00124 08 783879 785664 Aip09g00295 09 2894741 2896264 PCT