Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00277 ATGCCTTCACTCTCCGAAGCCTTTAGAGAACACCCTTTGCACCTTCACCACAATAAGCTCCTTGATTTCAATTCCTTAGAAGAACTCCCAGATTCTTATGCTTGGATACAAATAGATCAAGATGATCACACAATAACTAACCCTAACCCTAATTACCCTTCAAATTCTTGTCATGGAGATGAGAATGTCCCAATTATCAACCTCAATGATCCAAATGCTCCAAAGCTTATAGGCAATGCATGTAAAACATGGGGTGTGTTCCAAGTTGTGAATCATGGGATCCCCATGAGTCTTTTTCGTGACATTCAGCAAACCGGTCAGGCCCTATTTTCATGCTCGACTCACCAAAAGCTCAAAGCAGCTCGAACCCCAGATGGGGTGTCGGGTTATGGCCGAGCCCGAATTTCGTCCTTCTTCCCAAAACTTATGTGGTCTGAGTGCTTCACTATTGTTGAGTCCCCTCTTGAACATTTCATCCAACTATGGCCCCATGAGTACAACAAACACTGTGATGTAGTGGTGCAATATGAAGAAGCCATGAAAAAGTTAGCACAAAAGTTAATGTGGATGGTGTTGACTTCTCTTGGCATTTCAAAAGAAGAACTCAAATGGGCCGCCGGCCCAAAAGGTGAATTCAAATGGGCCTGTTCAGCCTTGCACTTGAACTCCTACCCTAGTTGTCCGGATCCGGATCGGGCCATGGGTCTCGCCCCACATACCGACTCGACTCTCCTCACAATTCTATACCAAAATGATGTAAGCGGGTTGCAAGTCCTAAGGGAAGGTGTCGGCTGGGTGGCGGTGCCACCCCTTCCCGGTGGACTTGTGATCAACATGGGTGACCTCTTCCACATTTTGTCGAATGGGTCGTACCCGAGTGTGCTCCATCGGGTGCTAGTGAACCGAACCCGGCAAAGATTTTCGGTTGCATATCTATATGGGCCCCCACCAAATGTCCACATACGTCCACATCCAAAGCTAATAGGCCCAAATAGACGTGCCCTTTATCGGCCACTATGGGAATCACGGAAGGTTGCTTCAAGGAATCCTGATTCTTCATCATCTCTTCCAAGCGGCGCCATCCCAATTCTTCAACCTCTATCCCAAGCGGCGCCCAGCTCCTCCATCCAACCATCCAAGCAGCGCTCCCTTCTTGGTACCCGTCGGAACTCCCACAAGGACGATCATGCCAAGTGTTTCCTTCACAAAGAAGCGGCTGTTGCGGTGCAAGAATTCTGGAACCACACAACATCATCCATGGAGTTTTCAACCCCGCTATGGGAATCACGGAAGGTTGCTTCAAGGAATCCTGATTCTTCATCATCTCTTCCAAGCGGCGCCATCCCAATTCTTCAACCTCTATCCCAAGCGGCGCCCAGCTCCTCCATCCAACCATCCAAGCAGCGCTCCCTTCTTGGTACCCGTCGGAACTCCCACAAGGACGATCATGCCAAGTGTTTCCTTCACAAAGAAGCGGCTGTTGCGGTGCAAGAATTCTGGAACCACACAACATCATCCATGGAGTTTTCAACCCCGGTGAGCGGATCGAACAACACAGTGACCAATTCAACCCAAGGCGATGAAGAATTGAGTGCGGGTGAAGTTGTTATTCAAGAGTAA 1620 0.4889 MPSLSEAFREHPLHLHHNKLLDFNSLEELPDSYAWIQIDQDDHTITNPNPNYPSNSCHGDENVPIINLNDPNAPKLIGNACKTWGVFQVVNHGIPMSLFRDIQQTGQALFSCSTHQKLKAARTPDGVSGYGRARISSFFPKLMWSECFTIVESPLEHFIQLWPHEYNKHCDVVVQYEEAMKKLAQKLMWMVLTSLGISKEELKWAAGPKGEFKWACSALHLNSYPSCPDPDRAMGLAPHTDSTLLTILYQNDVSGLQVLREGVGWVAVPPLPGGLVINMGDLFHILSNGSYPSVLHRVLVNRTRQRFSVAYLYGPPPNVHIRPHPKLIGPNRRALYRPLWESRKVASRNPDSSSSLPSGAIPILQPLSQAAPSSSIQPSKQRSLLGTRRNSHKDDHAKCFLHKEAAVAVQEFWNHTTSSMEFSTPLWESRKVASRNPDSSSSLPSGAIPILQPLSQAAPSSSIQPSKQRSLLGTRRNSHKDDHAKCFLHKEAAVAVQEFWNHTTSSMEFSTPVSGSNNTVTNSTQGDEELSAGEVVIQE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00277 539 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 342 - -
Aip09g00277 539 Pfam 2OG-Fe(II) oxygenase superfamily 218 315 IPR044861 -
Aip09g00277 539 Gene3D - 18 349 IPR027443 -
Aip09g00277 539 MobiDBLite consensus disorder prediction 369 390 - -
Aip09g00277 539 MobiDBLite consensus disorder prediction 507 529 - -
Aip09g00277 539 MobiDBLite consensus disorder prediction 369 385 - -
Aip09g00277 539 MobiDBLite consensus disorder prediction 507 539 - -
Aip09g00277 539 SUPERFAMILY Clavaminate synthase-like 17 339 - -
Aip09g00277 539 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 342 - -
Aip09g00277 539 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 214 315 IPR005123 -
Aip09g00277 539 MobiDBLite consensus disorder prediction 456 477 - -
Aip09g00277 539 MobiDBLite consensus disorder prediction 456 472 - -
Aip09g00277 539 Pfam non-haem dioxygenase in morphine synthesis N-terminal 64 164 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00277 Aip-Chr9 2571738 2585515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00277 66 335 Glycosyltransferase AT5G59530 29.433 1.29e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00277 K04124 - gmx:100794180 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00277 09 2571738 2585515 Aip09g00277 09 2571738 2585515 ECH
Aip08g00119 08 718798 720344 Aip09g00277 09 2571738 2585515 PCT