Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00119 ATGCCTTCACTCTCCGAAGCCTACCATTCCCACCCTGTGGAGGTTCACCACCACAAGCACCCTGACTTCAAGTCCCTTCAAGAATTACCGGATTCGTACGCTTGGACACACCCAGGAGATCATGCTCTCGCCATCAATACTACTTCTTCCAACTTTGGTAGCGTTCCGGTTATTGATCTGTCTGACCGGAACGCAACCAGGCTTATAGGGCATGCATGCAGGACCTGGGGTGCTTTCCAGGTCGTGAATCATGGGGTGCCCTTAAGCCTCCTTGACCACATTCAGTGGGTTGGCCAGACTCTCTTCTCACTCTCGACTCACCAAAAGCTTAAAGCCGCTCGCTCTCCAGATGGAGTGACCGGCTACGGCCTCGCCCGCATCTCCTCCTTCTTCCCCAAGCTCATGTGGTCCGAGGGCTTCACCATCCTTGGATCCCCTCTTGAACATTTCCAAAAACTCTGGCCCCAGGATTACGCTAAATACTGTGATATTGTCGTGGAATATGATGAAACCATGAAAAAGCTAGCGGGAAAGTTAATGGGCCTCATGTTGGACTCTCTCGGCATTTCAAAGGAGGAACTCAAATGGGCCTGCCCCAACAAAGGCCCATTTTTCAAAGACACATGCGGTGCCTTGCAATTGAACTCCTACCCGACTTGTCCGGATCCGGATCGAGCCATGGGGCTCGCCCCGCACACCGATTCCACCCTCCTCACAATCCTTTACCAAAACAACATAAGCGGGTTGCAGGTTCACCGGGAGAGCACCGGGTGGGTGACCGTGCCGCCGATCCCGGGTGCTCTCGTGGTAAATGTCGGCGACCTCTTCCACATTTTGTCAAACGGGTTATACCCGAGTGTGCTCCATCGGGTTCTGGTGAATCGGAGCAAGCAGCGGTTTTCGGTTGCCTACCTATATGGGCCCCCATCGAATGTGGAGATATGTCCACATGCGAAGCTAGTGGGCCCAACTAGGCCTGCTCTCTATAGGCCAGTGACTTGGAATGAGTACCTTGGCACCAAAGCAAAGCACTTCAATAAAGCACTCTCTTCCTTTCAACTATGTGCACCTAAAAACGGTTTGTTTGATGTAAACGAGTCTCACAAAAATAGTGTCCAAGTGGGTTAA 1128 0.5213 MPSLSEAYHSHPVEVHHHKHPDFKSLQELPDSYAWTHPGDHALAINTTSSNFGSVPVIDLSDRNATRLIGHACRTWGAFQVVNHGVPLSLLDHIQWVGQTLFSLSTHQKLKAARSPDGVTGYGLARISSFFPKLMWSEGFTILGSPLEHFQKLWPQDYAKYCDIVVEYDETMKKLAGKLMGLMLDSLGISKEELKWACPNKGPFFKDTCGALQLNSYPTCPDPDRAMGLAPHTDSTLLTILYQNNISGLQVHRESTGWVTVPPIPGALVVNVGDLFHILSNGLYPSVLHRVLVNRSKQRFSVAYLYGPPSNVEICPHAKLVGPTRPALYRPVTWNEYLGTKAKHFNKALSSFQLCAPKNGLFDVNESHKNSVQVG 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00119 375 Gene3D - 19 348 IPR027443 -
Aip08g00119 375 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 155 IPR026992 -
Aip08g00119 375 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 368 - -
Aip08g00119 375 MobiDBLite consensus disorder prediction 1 21 - -
Aip08g00119 375 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 368 - -
Aip08g00119 375 Pfam 2OG-Fe(II) oxygenase superfamily 212 308 IPR044861 -
Aip08g00119 375 PRINTS Isopenicillin N synthase signature 69 86 - -
Aip08g00119 375 PRINTS Isopenicillin N synthase signature 232 253 - -
Aip08g00119 375 PRINTS Isopenicillin N synthase signature 268 294 - -
Aip08g00119 375 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 207 308 IPR005123 -
Aip08g00119 375 SUPERFAMILY Clavaminate synthase-like 15 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00119 Aip-Chr8 718798 720344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00119 51 349 Glycosyltransferase AT5G59530 33.119 1.56e-40 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00119 K04124 - gmx:100798572 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00119 08 718798 720344 Aip08g00119 08 718798 720344 ECH
Aip08g00119 08 718798 720344 Aip09g00277 09 2571738 2585515 PCT