LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip09g00261	ATGTGGCGGAGGCTACTCTCTTCTAACCTCAAATCCCTAATTTCCCATTCTGCCCCTCTTTCATCTACCACTCCCCGATCTGCTTCCGCCGCCGCCAGATTCGCCACTGCCGCCACCGCTTCCCACTCCTCCACCCTCCTCTCCCGCCACTTCTCCACCCAATCTGATGATGGTAAAGCAGTGAAGAAGACTGTTCAGGATGTAATGCCAATTGCTACTGGGCACGAAGCTGAGGAGATTCAGGCTGATCTTGAGGGGAGGGATATCCTTGAAATAGATCATCCTGAAGGTCCTTTCGGTACAAAGGAAACACCAGCTGTTGTTAAATCTTACTATGATAGAAGGATAGTTGGATGCCCAGGAGGTGAAGGTGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTCATGAATGCCCAGTTTGCTCTCAGTACTTTGTGCTTGAAGTGGTGGGACCTGGCGGAGATCCTTACGGACACGGGGACGACGAACACCACCATTAA	516	0.5136	MWRRLLSSNLKSLISHSAPLSSTTPRSASAAARFATAATASHSSTLLSRHFSTQSDDGKAVKKTVQDVMPIATGHEAEEIQADLEGRDILEIDHPEGPFGTKETPAVVKSYYDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGDPYGHGDDEHHH	171

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip09g00261	171	Gene3D	Cytochrome c oxidase, subunit Vb	61	155	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Aip09g00261	171	SUPERFAMILY	Rubredoxin-like	60	158	-	-
	Aip09g00261	171	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	60	159	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Aip09g00261	171	Pfam	Cytochrome c oxidase subunit Vb	69	160	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Aip09g00261	171	CDD	Cyt_c_Oxidase_Vb	60	157	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Aip09g00261	171	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	170	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Aip09g00261	171	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B	1	170	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip09g00261	Aip-Chr9	2393092	2397221	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip09g00261	K02265		-	gmx:100819356	212.231

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip09g00261	09	2393092	2397221	Aip08g00103	08	579971	582719	ECH
	Aip09g00261	09	2393092	2397221	Aip09g00261	09	2393092	2397221	ECH
	Aip08g00103	08	579971	582719	Aip09g00261	09	2393092	2397221	PCT