LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip08g00103	ATGTGGCGGAGGCTCGTCTCTTCTCACTTCAAATCCCTAACTGCACTCTCACCTTCTTCTCATTCCCGATCCGCTTCGCCAGCCCTCCGATTCGCCGCCGCCGCCGCCGCTCCTTCCTCCGCTCCCTTCATTAATCGCCATGTCTCCACCCAATCAGGTGGTAAGGTAAAACTTAGGGTTGAGGATGTAATGCCCATTGCCACTGGGCACGAACGCGAGGAGATTCAGGCTGATCTCGAGGGAAGGAATATTCTTGAAATAAACCATCCTGAAGGTCCATTCGGCACAAAGGAAGCACCTGCTATTGTAAAGTCTGTCTATGATAGAAGGATAGTCGGATGCCCCGGAGGTGAAGGTGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAGGGCAAGCCTTATGAATGTCCAGTATGCTCACAATGTTTTAAGCTTGAAGTGGTGGGAGCCGGTGGTGATCCTTATGAACATGGTCACCATTGA	489	0.5133	MWRRLVSSHFKSLTALSPSSHSRSASPALRFAAAAAAPSSAPFINRHVSTQSGGKVKLRVEDVMPIATGHEREEIQADLEGRNILEINHPEGPFGTKEAPAIVKSVYDRRIVGCPGGEGEDEHDVVWFWLEKGKPYECPVCSQCFKLEVVGAGGDPYEHGHH	162

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip08g00103	162	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B	1	161	-	-
	Aip08g00103	162	SUPERFAMILY	Rubredoxin-like	60	152	-	-
	Aip08g00103	162	CDD	Cyt_c_Oxidase_Vb	59	152	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Aip08g00103	162	Gene3D	Cytochrome c oxidase, subunit Vb	57	150	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Aip08g00103	162	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	54	154	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Aip08g00103	162	Pfam	Cytochrome c oxidase subunit Vb	67	157	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Aip08g00103	162	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	161	IPR002124	GO:0005740\|GO:0005751\|GO:0006123

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip08g00103	Aip-Chr8	579971	582719	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip08g00103	K02265		-	gmx:100801050	216.853

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip09g00261	09	2393092	2397221	Aip08g00103	08	579971	582719	ECH
	Aip08g00103	08	579971	582719	Aip08g00103	08	579971	582719	ECH
	Aip08g00103	08	579971	582719	Aip09g00261	09	2393092	2397221	PCT