Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00260 ATGAGCTATGCACAACACTCTCCTCCTCTGGGGTCTGGTAGTAAAACACCTACTAGCAGAAGAACTTTTGAGTTTGGAAAGACACATGTAGTGAGGCCAAAAGGGAAACACCAAGCTACTATAGTTTGGCTCCATGGTCTTGGTGACAATGGGTTGAGCTCATCTCAGCTCCTGGAATCCCTCCGTCTTCCAAATATAAAATGGATTTGCCCAACTGCTCCAATCCGTCCAGTAAAGACACTTGGCGGTTTTACTTGCACTTCATTGAAAGTTGGAATAGGAGGGTTCAGCATGGGAGGAGCAGTAGCAGCATATTCAGCAACATGCTATGCAATGGGAAGCTTCTCAAATGGAATGCCTTACCCTCTCTCCAACCTCACTTCTGTTCTTGCTCTTAGTTCATGGCTTCCTGGGGGACCCACTTGTAGGACCCTTTTAAGGAACAACAACAACGTTAACACCATACATGCTAAGACTCGAGCTGCTTCATTACCTATTTTCCTTGCACATGGAATTGCTGACGATGTTGTGCTCTATAAATACGGACACCAATCTGCTCACTCCTTATATTCTGCTGGTTTTCGATGCATCACTTTTAAATCTTATGATGGGATTGGTCATTACACAATTCCTACAGAGATGGATGATGTCGCCAATTGGCTCAAATCAAACCTTGGCCTTGAGGGATAA 690 0.4449 MSYAQHSPPLGSGSKTPTSRRTFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLRLPNIKWICPTAPIRPVKTLGGFTCTSLKVGIGGFSMGGAVAAYSATCYAMGSFSNGMPYPLSNLTSVLALSSWLPGGPTCRTLLRNNNNVNTIHAKTRAASLPIFLAHGIADDVVLYKYGHQSAHSLYSAGFRCITFKSYDGIGHYTIPTEMDDVANWLKSNLGLEG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00260 229 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 88 - -
Aip09g00260 229 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 90 229 - -
Aip09g00260 229 Gene3D alpha/beta hydrolase 19 226 IPR029058 -
Aip09g00260 229 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 88 - -
Aip09g00260 229 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 90 229 - -
Aip09g00260 229 MobiDBLite consensus disorder prediction 1 20 - -
Aip09g00260 229 Pfam Phospholipase/Carboxylesterase 90 223 IPR003140 GO:0016787
Aip09g00260 229 Pfam Phospholipase/Carboxylesterase 28 83 IPR003140 GO:0016787
Aip09g00260 229 SUPERFAMILY alpha/beta-Hydrolases 29 224 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00260 Aip-Chr9 2367575 2372024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00260 1 229 Acyl Lipid Metabolism Gene Families AT3G15650 52.768 7.70e-82 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00260 K06130 - gmx:100782153 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00260 09 2367575 2372024 Aip08g00102 08 569055 572631 ECH
Aip09g00260 09 2367575 2372024 Aip09g00260 09 2367575 2372024 ECH
Aip08g00102 08 569055 572631 Aip09g00260 09 2367575 2372024 PCT