Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00102 ATGAGCTATGGACATCCTTATATGGGTTCAGGTAGCCGAACTGCTCGAAGAACTTTTGAGTTCGGGAAGACGCATGTAGTGAGGCCAAAAGGAAAACACCAAGCCACCATAGTATGGCTGCATGGTCTTGGTGATAATGGTTTGAGCTCATCTCAGCTCCTGGAATCTCTTCCACTTCCAAATATAAAATGGATTTGCCCAACTGCTCCTACCCGTCCTGTGGCCATACTTGGTGGCTTTCCTTGCACTGCATGGTTTGATGTGGGAGAACTCTCAGAAGAGGGTCCGGATGATTGGGAAGGTTTAGATGCCTCAGCAGCACACATAGCTAACTTGCTGTCAACAGAACCAGCTGATGTGAAAGTTGGAATAGGAGGGTTCAGTATGGGTGCAGCAATAGCACTTTACTCTGCAACATGTTTTGCTATGGGAAGGTATGGAAATGGCATCCCATACCCTGTCAACTTAAGAGCTGTTGTTGGACTAAGTGGCTGGCTTCCAGGCTCAAGGAGCTTAAGGAACAAAATAGAAGTGTCACATGAATCAAGAAGGCGAGCTGCTTCATTACCCATGTTGCTGTGTCATGGAATATGTGATGATGTAGTTCCATGCAAATACGGAGAGAAATCAGCCCAATGCTTATGTTCATCAGGATTTCGATATGTTGCATTCAAAAGCTATGATGGGATTGGTCACTATACAGTTCCAAGAGAGATGGATGAGGTATGCAACTGGCTTAACTCCAAGCTAGGCCTTGAGGGATCTCCATAA 771 0.4565 MSYGHPYMGSGSRTARRTFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEEGPDDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAIALYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSRSLRNKIEVSHESRRRAASLPMLLCHGICDDVVPCKYGEKSAQCLCSSGFRYVAFKSYDGIGHYTVPREMDEVCNWLNSKLGLEGSP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00102 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Aip08g00102 256 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
Aip08g00102 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Aip08g00102 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Aip08g00102 256 Gene3D alpha/beta hydrolase 15 251 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00102 Aip-Chr8 569055 572631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00102 1 254 Acyl Lipid Metabolism Gene Families AT5G20060 66.929 5.20e-131 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00102 K06130 - gmx:100798395 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00260 09 2367575 2372024 Aip08g00102 08 569055 572631 ECH
Aip08g00102 08 569055 572631 Aip08g00102 08 569055 572631 ECH
Aip08g00102 08 569055 572631 Aip09g00260 09 2367575 2372024 PCT