Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00250 ATGGAGGCCTTACAGTTGCAGAGTTTGTTTCCCAGAACATTATCCACACTTTCATCATCTCCAAGAGCAAGAACATCATCATCATCATCATCATTGCAACTCAACATCTTCATCAGCAACCATAAAGCATTGAGCTTGACCTCATCATCTTCTGGTTCTTCAACCGTGGCTGTTAGAGCAGGATGGTTCTTGGGCCTCACAGACAGCAAGAACAAGAAGATGGGTTTGCCTGAGACAGTGAAAGCAGGTGACCCAGTTCTGCATGAGCCTGCAGAGGATGTGGATCCCAATGAGGTTAGGTCTGAGAGGATTCAGAAGATCATTGATGACATGATCAGGGTCATGAGAAAAGCTCCTGGTGTTGGCCTTGCTGCTCCCCAGATTGGTGTTCCATTAAGGATAATTGTTTTGGAAGATACCACAGAGTATATTGGTTATGCACCAAAGGAAGAGGTCAAAGCTCAAGATAGAAGACCTTTTGATCTTTTGGTGATCCTGAATCCCAAACTCCTGAAAAAGAGCAACAAGACTGCCCTATTTTTTGAAGGATGCCTAAGTGTTGATGGATTCAGAGCATTGGTGGAGCGACACCTTGACGTCGAGGTCACCGGTTTGGATCGATATGGCGAACCAATCAAAGTAACAGCTTCTGGTTGGCAGGCGCGGATTTTACAACACGAGTGTGATCACTTGGAAGGAACTCTGTATGTTGACAAGATGGTGCCTAAAACTTTCAGAACAGTAGAAAACCTGACCCTGCCTCTTGCTAAGGGGTGCCCCAAACTCGGCTCTCGCTAG 798 0.4599 MEALQLQSLFPRTLSTLSSSPRARTSSSSSSLQLNIFISNHKALSLTSSSSGSSTVAVRAGWFLGLTDSKNKKMGLPETVKAGDPVLHEPAEDVDPNEVRSERIQKIIDDMIRVMRKAPGVGLAAPQIGVPLRIIVLEDTTEYIGYAPKEEVKAQDRRPFDLLVILNPKLLKKSNKTALFFEGCLSVDGFRALVERHLDVEVTGLDRYGEPIKVTASGWQARILQHECDHLEGTLYVDKMVPKTFRTVENLTLPLAKGCPKLGSR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00250 265 CDD Pep_deformylase 80 236 IPR023635 GO:0042586
Aip09g00250 265 Pfam Polypeptide deformylase 80 243 IPR023635 GO:0042586
Aip09g00250 265 PANTHER PEPTIDE DEFORMYLASE 32 264 IPR023635 GO:0042586
Aip09g00250 265 Gene3D Peptide deformylase 76 265 IPR036821 -
Aip09g00250 265 Hamap Peptide deformylase [def]. 75 251 IPR023635 GO:0042586
Aip09g00250 265 PANTHER PEPTIDE DEFORMYLASE 32 264 - -
Aip09g00250 265 SUPERFAMILY Peptide deformylase 74 248 IPR036821 -
Aip09g00250 265 TIGRFAM pept_deformyl: peptide deformylase 80 243 IPR023635 GO:0042586
Aip09g00250 265 PRINTS Peptide deformylase signature 109 138 IPR023635 GO:0042586
Aip09g00250 265 PRINTS Peptide deformylase signature 182 193 IPR023635 GO:0042586
Aip09g00250 265 PRINTS Peptide deformylase signature 194 212 IPR023635 GO:0042586
Aip09g00250 265 PRINTS Peptide deformylase signature 213 242 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00250 Aip-Chr9 2268719 2271788 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00250 K01462 - gmx:100784292 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00250 09 2268719 2271788 Aip09g00250 09 2268719 2271788 ECH
Aip08g00092 08 536723 538023 Aip09g00250 09 2268719 2271788 PCT