Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00213 ATGCTTTCACTGAATTTCTCAACAAGTTTGTCAAGAGAGACGTGTAGTGTTGTTTTCAACTCTGAAAGAAAAGTTCTAGAGAGAGCATTTGAGGAATGTGACAATGATCTAGATGCTGCCATCAAGAGGCTGAACGAGCTTTGCTTGGGGACTACTGATGGAAATACTGGAACTGCTGAAGAACCACAAGTTGCTATGCTTAGACATGAGAATTTGTTGCTAAAGGAGCAAATTAAGGTGCTGATTAAGGAAAGAAATTCTTTTAAAAATGCATTTAGAATCCAGCATGAGCGTTTTTCTGATTATGATGAAAAGAACCAAGAGTTGCAGCATTTGAAGCAGTTAGTATCTCAATATCAAGAACAGATCAGAACTCTTGAGGTGAACAACTATGCTTTGGCAATGCATTTGAAGCAAGCTCAACAGAGCAACCCCTTTCCAGGGCATTTCCCTCCTGATGTCTTCTAA 468 0.3932 MLSLNFSTSLSRETCSVVFNSERKVLERAFEECDNDLDAAIKRLNELCLGTTDGNTGTAEEPQVAMLRHENLLLKEQIKVLIKERNSFKNAFRIQHERFSDYDEKNQELQHLKQLVSQYQEQIRTLEVNNYALAMHLKQAQQSNPFPGHFPPDVF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00213 155 CDD CUE 22 44 - -
Aip09g00213 155 Coils Coil 102 129 - -
Aip09g00213 155 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 16 63 - -
Aip09g00213 155 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 61 155 - -
Aip09g00213 155 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 61 155 - -
Aip09g00213 155 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 16 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00213 Aip-Chr9 1878817 1879871 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00213 - - aip:107614685 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00213 09 1878817 1879871 Aip09g00213 09 1878817 1879871 ECH
Aip08g00062 08 375602 378267 Aip09g00213 09 1878817 1879871 PCT