Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00062 ATGTCTGCTGCGGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGAGCTTCCTCCTTCTTCGCCACCAACATCTGTCTCCAAGAGGCTGCGCTGCTCCTCTTCTTCCCCAATTCGTCTCTCCCTTCCCACTCTCATCGATCACCTTCGCCATCATTTCCCTCATATGGATGACCAGGTTCTCGAGAGAGCGCTCCAAGAATGCGGAAATGATCTAGATGCTGCCATCAAGAGGTTGCATGGCCTTTGTTTGGGATCTGCAGATGAAAGTTCTGCTACCCTTGAGCAACCAGATGCTGCCGTGGAGACAGGTGTATTGGAAGATAATATTAATGGGGATGCTTCTGCTTCTGCTTCTGGGAACCAGTCAGCTACAAGCAACTTTCCTTCTGATGGAGCAGAGTGGATTGACCTGTTTGTTAGAGAAATGACGTGTGCTACCAGCATCGATGATGCCAGAGCCCGTGCTGCTAGACTTCTGGAGGTTCTAGAGAAATCAATCAGTGCCCTTGCAAGTTCCGAGGAAACAATTGCACTTCGCAAGGAGAACCTGATGCTGAAGGAGCAAATTGAAGCCTTGACTAAGGAGAGAAATTGTTTTAAAAGTGCCTTCAGAATCCAGCATGAAAGGCTGTCCGACTATGAGGTCAAAAGCCAAGAGTTGCAACAGTTGAAGCAATTGGTGTCTCAATACCAGGAACAGATCAGAACTCTCGAGGTGAATAACTATGCCTTGCGAATGCATTTGAATCAGGCTCAACAGTACAACCCCTTTCCTGGGCGTTTCCCTCCTGATGCCTTTTAA 801 0.4806 MSAAVCGSKRSFFEELPPSSPPTSVSKRLRCSSSSPIRLSLPTLIDHLRHHFPHMDDQVLERALQECGNDLDAAIKRLHGLCLGSADESSATLEQPDAAVETGVLEDNINGDASASASGNQSATSNFPSDGAEWIDLFVREMTCATSIDDARARAARLLEVLEKSISALASSEETIALRKENLMLKEQIEALTKERNCFKSAFRIQHERLSDYEVKSQELQQLKQLVSQYQEQIRTLEVNNYALRMHLNQAQQYNPFPGRFPPDAF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00062 266 Pfam CUE domain 45 78 IPR003892 GO:0043130
Aip08g00062 266 Coils Coil 213 240 - -
Aip08g00062 266 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 266 - -
Aip08g00062 266 ProSiteProfiles CUE domain profile. 40 86 IPR003892 GO:0043130
Aip08g00062 266 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 266 - -
Aip08g00062 266 CDD CUE 44 78 - -
Aip08g00062 266 Gene3D - 34 89 - -
Aip08g00062 266 Coils Coil 175 195 - -
Aip08g00062 266 SUPERFAMILY UBA-like 43 85 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00062 Aip-Chr8 375602 378267 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00062 - - gmx:100815998 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00062 08 375602 378267 Aip08g00062 08 375602 378267 ECH
Aip08g00062 08 375602 378267 Aip09g00213 09 1878817 1879871 PCT