Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00204 ATGATTACACCTGCATTCATGGCGATTGATGCTGGCATTGCTGTAACTAATAACAAAGAGAAACCTGATTTAGGAGAACATCCGAATCTACCTAAGAGAAAGAAGTCTATTGTGTGGGAATATTTCACTGTTGAAACTGTTGGAGCTGGATGTACCAGGGCATATTGCAAACAGTGCAACAAATCCTTTTCTTATATAAATGATTCAAAACTAGCCGGCACAAGTCATCTGAAAAGGCACATTACTTTAGGAATTTGTCAAGTTATTCGGCAGAAAAATCAACAAGGAGAAACTCAAGATACTCCCAATCCACCCAAGAAACGTCCAAGAGCAACACCTGGATATGCTGGTAATGGTGTCTCATTTGATCAGAGCCGGAGCAACCATGATATTGCTAAAATGATAATTTTACATGATTATCCACTTCATATTGTGGAGCAGCAGGGTTTCATTGATCTTGTGCGGATTCTTCAACCCCAGTTCAATCCGATCCGATCTGATTCTGTCGAAGAGGATTGTGTTGCTTTATATGTAAGAGAGAAGCAAAATCTTTTGAATCTTATCAATGGTATTCCCGGACTGGTTAACCTGACATTGGACTTATGGACTTCAAACGAGGCAATGGGCTATGTTTTTGTCCGTGGACACTTCATTGATGGCAATTGGAACTTACATCATCCTGTTCTAAATGTCATTAAGGTACCATTTCCTCTTTCCGATGGTTCCTTAAGCCACACTATATTAACATGTCTATCTGACTGGAATTTAGAGGGACGACTCCTTACCCTTGCACTTGATAAATCCTTCTCCAGTGAGACTTTGATGGGAAATCTGAAAGGCTTTCTTTCTTCCAAGAACCCAGTGATCCTCAATGATCAGTTCTTAAACCAGAATTGTTATGCCCGTGTTCTTAGTCACCTTGCACTGGACGCATTACAGGCAATGAAGGAAACTGTTGACAAGGTCCGTCAAAGTGTGAAGTATGTAAAGTCTTCAGAATCTCACCTAGAAAAGTTTATTGAACTGAAACAACAACTACAAGTCCCAAGTAaagtggaccttgtacttgatgacacaagtagatgggattcaacataccatatgcttcttgctgcctgtgaattaatggaagtctttgcttgcttcgatacagctgatcctgattacagaatgacccttacgatggatgaatggaagcaggttgaaaaactctgcaaatatttgaaatgttttcatgatgcagcgaacattttgactttgcaaccatacccgaccgcaaacttatttttcCCTGAAGTGTCAAAACTTCAGGTGGAGTTGACTTATGCGGCATTTAGCGATGATCCCTTCCTTAGTGGTCTGATTAAGCCTTTGTATGAGAAGTTTGATCGGTATTGGAGAGAAAGCTGCCCCATCTTGGCAATGGCCGTTGCCCTCGATCCAAGGCATAAAATGAAACTTGTGGAGTTCACCTTTTCTAAGATACTTGGTGAGAATGCAGAGCCATGGATAAGAACAGTTGATGATGCCCTTCGTGAAATGTTCATAGAATATAACATCCAAATGCTTCCGTTTGAAACAATCAATGGGGATGATGAAGGGGATGAGATCATGATAAAGACAGAGCTGTGCCCAGAAGGTTCTCTTGATGATTCTATCTATCTTGATGACTATGAATTTTATATATCCGATTTTGTCGGTAACCAGCAATTCAAGTCAGAATTGGATGAGTATCTAGAAGAACCTCTACTATCCAGTCATCAAGAATTTGATATTTTGTGTTGGTGGAGGCTGAATGGATACAGGTATCCAACCTTGTCAAGAATTGCATCCGATCTTTTGTCTATGCCAACGTCTACAGTGTCTCGGGATTCTGTTTTTGACACAGAAATTAGGAAAATGGATAGTTACAGGAGTTCATTAAGCCCTAGGACTATTGAGGCTCTTATTTGTGCCAAGGATTGGTTACAGAATAAAATCTTACCAACAGATGATTCAAAAGCATTTGTGAAAATGGAATTTTAG 2025 0.3526 MITPAFMAIDAGIAVTNNKEKPDLGEHPNLPKRKKSIVWEYFTVETVGAGCTRAYCKQCNKSFSYINDSKLAGTSHLKRHITLGICQVIRQKNQQGETQDTPNPPKKRPRATPGYAGNGVSFDQSRSNHDIAKMIILHDYPLHIVEQQGFIDLVRILQPQFNPIRSDSVEEDCVALYVREKQNLLNLINGIPGLVNLTLDLWTSNEAMGYVFVRGHFIDGNWNLHHPVLNVIKVPFPLSDGSLSHTILTCLSDWNLEGRLLTLALDKSFSSETLMGNLKGFLSSKNPVILNDQFLNQNCYARVLSHLALDALQAMKETVDKVRQSVKYVKSSESHLEKFIELKQQLQVPSKVDLVLDDTSRWDSTYHMLLAACELMEVFACFDTADPDYRMTLTMDEWKQVEKLCKYLKCFHDAANILTLQPYPTANLFFPEVSKLQVELTYAAFSDDPFLSGLIKPLYEKFDRYWRESCPILAMAVALDPRHKMKLVEFTFSKILGENAEPWIRTVDDALREMFIEYNIQMLPFETINGDDEGDEIMIKTELCPEGSLDDSIYLDDYEFYISDFVGNQQFKSELDEYLEEPLLSSHQEFDILCWWRLNGYRYPTLSRIASDLLSMPTSTVSRDSVFDTEIRKMDSYRSSLSPRTIEALICAKDWLQNKILPTDDSKAFVKMEF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00204 674 Pfam hAT family C-terminal dimerisation region 574 656 IPR008906 GO:0046983
Aip09g00204 674 ProSiteProfiles Zinc finger BED-type profile. 33 93 IPR003656 GO:0003677
Aip09g00204 674 SUPERFAMILY Ribonuclease H-like 189 658 IPR012337 -
Aip09g00204 674 PANTHER BED FINGER-RELATED 26 661 IPR045259 -
Aip09g00204 674 Pfam Domain of unknown function (DUF4413) 422 518 IPR025525 GO:0003677
Aip09g00204 674 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 26 661 - -
Aip09g00204 674 SUPERFAMILY beta-beta-alpha zinc fingers 36 88 IPR036236 -
Aip09g00204 674 MobiDBLite consensus disorder prediction 93 119 - -
Aip09g00204 674 SMART bed5 33 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00204 Aip-Chr9 1812418 1815818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00204 - - gmx:106799409 960.674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00204 09 1812418 1815818 Aip09g00204 09 1812418 1815818 ECH
Aip08g00057 08 354593 357399 Aip09g00204 09 1812418 1815818 PCT