Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00057 ATGCGAAACCGAAAGAAATCTATTGTCTGGGAGTACTTCACTGTGAAAACTGTTAGCCCTGGATGTGCCAAGGCTTACTGTAAACAATGCAATAAGGAATTTGCTTACATGACAGGTTCGAAACAATCTGGCACAAGCCATCTCAAGAGGCACATTTCATTAGGAATCTGTCTGAAAAATCACCAAACCCCTTCTGGAGAAGATAATGTTCAGCCGCCAAGGAAACATTTCACAAAAGCAATGCCTCACGATGCCCACGTACCATTTGACCAGGAGCAATGCAATGACAACATAGCTAAGATGATCATTTTGCATGATTATCCACTTCATATTGTGGAACACCAGGGTTTCATTGATTTTGTGCGGTTACTTCAACCTCAGTACAATCCACTAAGCTTAAAAGATGTTCAAGGGGATTGCATCGCAATGTACCTCAGAGAAAAGCAAAACCTCTTAAATGTCATCAATGGGATTCCTGGACGAGTCAACCTTACTGTGGATTATTGGACTTCAAACCAGACATTGGCCTATGTTTTTCTTCGAGGACACTTCATTGGTGGTGATTGGAACTTACATCATCCCATTCTCAGTGTTATGATGGTGCCTTTTCCTGATTCTGACAATTCCTTGAATCAAACTATACTCTCTTGCATAAATGATTGGCATTTGGAGGGTCGGCTATTCACCATCACACTTGATAAGTTATTCTCAAATGGGACTTTGATGGGAAATCTCAGATGTCTCCTCTCTGTTAAGAACCCTGTGATCTTTGATGGTCAGTTATTAAGCCAGAACTGTTATGCCCGTGTGCTTAGTTGCCTTGCATTAGATGCACTGTCGGCAATGAAAGAAACTGTTGGTAGAATTCGCGAGAGTGTGAAGTATGTGAAATCTTCAGAATTTCATGAAGAGAAGTTTTTTGCGTTAAAGCGACAGCTTCAAGTCCCTACTATGATGGAGCTCTTAGTTGATGATCAAAATAAATGGGATACAGTTTATCGAATGCTTGCTGCTGCCTGTGAATTAAAGGAAGTCTTTGGTTGCTTTGATGACTTCGGTCCTGATTATAAAATGAATCTTACTATGGACGACTGGAAGCATGTGGAAAAGCTCTGCATGTGTTTAAAGTATTTGTACGATGCAGCTAACATCTTAACTATTCGACCATACCCAACTGCAAACTTGTTTTTCTGTGAAGCATCAAACCTTTTGCTAGAGTTGACACATGCAGCATTCAGCCAGGATCCTTTCTACAGTACACTGGTTATGCCTTTGCAAGAGAAATTTGATCGGTATTGGAGAGAAAGCTGTCTCATCTTGGCAGCTGCTGTAGCCATGGACCCAAGGTATAAAATGAAACTTGTAGAATCCACTTTTGCGAGGATATTTGGTCAGAATTCTGAACCATGGCTAAGAATTGTTGAGGATGGTCTACATGAACTGTTTGTTGAATATATCATACAAATGCTTCCTTCTTCAGCAACAAATGGTGATAAAGGGAACGAGGCTACTATAGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCCTGCCATGAAGAGTCACTTAATGGATCCCTCTTTGCTGAAGATGGGCTTTTTGATATTGAACTTTTTATATCTGACTTCACTGGTAACCATCAATTTAATTCAGAATTGAGTGAGTATTTGGAAGAACCTCTGGAGCCTCAAGTACAAGAATTTGATATTCTAAACTGGTGGAGAGGAAAGGAATGGAAGTACCCCACTTTGTCTAGAATGGCATCTGATATTTTGTCTATACCTGTATCCACTCTTTCTGCAGATTCTGCTTTTGACATGCAAATTAGAGAAATGGATAGCTATAGGTGTTCGTTGGGCTCTCTAACTCTTGAAGCCATTACATGTACCAAGGATTGGTTCCAGTACGAATAA 1920 0.4083 MRNRKKSIVWEYFTVKTVSPGCAKAYCKQCNKEFAYMTGSKQSGTSHLKRHISLGICLKNHQTPSGEDNVQPPRKHFTKAMPHDAHVPFDQEQCNDNIAKMIILHDYPLHIVEHQGFIDFVRLLQPQYNPLSLKDVQGDCIAMYLREKQNLLNVINGIPGRVNLTVDYWTSNQTLAYVFLRGHFIGGDWNLHHPILSVMMVPFPDSDNSLNQTILSCINDWHLEGRLFTITLDKLFSNGTLMGNLRCLLSVKNPVIFDGQLLSQNCYARVLSCLALDALSAMKETVGRIRESVKYVKSSEFHEEKFFALKRQLQVPTMMELLVDDQNKWDTVYRMLAAACELKEVFGCFDDFGPDYKMNLTMDDWKHVEKLCMCLKYLYDAANILTIRPYPTANLFFCEASNLLLELTHAAFSQDPFYSTLVMPLQEKFDRYWRESCLILAAAVAMDPRYKMKLVESTFARIFGQNSEPWLRIVEDGLHELFVEYIIQMLPSSATNGDKGNEATIEPEPEPEPEPEPEPCHEESLNGSLFAEDGLFDIELFISDFTGNHQFNSELSEYLEEPLEPQVQEFDILNWWRGKEWKYPTLSRMASDILSIPVSTLSADSAFDMQIREMDSYRCSLGSLTLEAITCTKDWFQYE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00057 639 SMART bed5 4 60 - -
Aip08g00057 639 PANTHER BED FINGER-RELATED 2 639 IPR045259 -
Aip08g00057 639 Pfam hAT family C-terminal dimerisation region 554 636 IPR008906 GO:0046983
Aip08g00057 639 MobiDBLite consensus disorder prediction 494 524 - -
Aip08g00057 639 ProSiteProfiles Zinc finger BED-type profile. 4 68 IPR003656 GO:0003677
Aip08g00057 639 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 2 639 - -
Aip08g00057 639 Pfam Domain of unknown function (DUF4413) 389 485 IPR025525 GO:0003677
Aip08g00057 639 SUPERFAMILY Ribonuclease H-like 159 637 IPR012337 -
Aip08g00057 639 SUPERFAMILY beta-beta-alpha zinc fingers 7 54 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00057 Aip-Chr8 354593 357399 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00057 - - gmx:106795554 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00057 08 354593 357399 Aip08g00057 08 354593 357399 ECH
Aip08g00057 08 354593 357399 Aip09g00204 09 1812418 1815818 PCT