Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00190 ATGGATTGGTTCTCATGGCTTTCAAAAGCAGGCCTTGATCCTTCCCTAGTATATGAATACGGACTCCTCTTTTCACACAACGAGCTTGAAGAAGAAGACATCAAGTACTTCAACCACGAGTTCCTCCAGAGCATGGGGATCTCCATAGCCAAGCACAGGCTGGAGATCCTCAAGCTCGTTCATCGGAACAAGGCCGCCACCGCGGCTACCACGAAGAAGTACATCAAAACCAATAATTACCCTACGATACTCCATGTTTCAAGGATCATGCATGCATTCAAGAAGACAAGAAGGTGCTTGTCAAGTTACTTGAAAACAATGATTGGTTGCGAGGACTCCACGCTCGCCGTGGTTCCAATACCAAGGCCTTGTTCTTCGTATGGAACCACGGCGAAGTGGAAGAGCGCCGTGTTGAAGAGGAACAACACCAAGAATCAAAAGAATTATCTTCATCATCATCATCACCAAGAGAGGCTGTTGCTTACAAATGGAAGCCCTATAACATCATCAACAATGGTGGTTCCTGCATTGCCTGCTCCTGATGGATTCTATAGTAGTCCCATGGTTTACCATTTCCAGAAGGAAGAGAAGATGGACGCCGGCGACGACGACGACGGATATTGGTCTTCTGCGGTTCAAGATTTCAGAAGAGGCCATGGCAACATCATTATTGTCTGA 678 0.4676 MDWFSWLSKAGLDPSLVYEYGLLFSHNELEEEDIKYFNHEFLQSMGISIAKHRLEILKLVHRNKAATAATTKKYIKTNNYPTILHVSRIMHAFKKTRRCLSSYLKTMIGCEDSTLAVVPIPRPCSSYGTTAKWKSAVLKRNNTKNQKNYLHHHHHQERLLLTNGSPITSSTMVVPALPAPDGFYSSPMVYHFQKEEKMDAGDDDDGYWSSAVQDFRRGHGNIIIV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00190 225 CDD SAM_superfamily 2 62 - -
Aip09g00190 225 PANTHER OSJNBA0033G05.11 PROTEIN 1 217 - -
Aip09g00190 225 Gene3D - 1 69 IPR013761 -
Aip09g00190 225 Pfam SAM domain (Sterile alpha motif) 23 58 IPR001660 GO:0005515
Aip09g00190 225 PANTHER OSJNBA0033G05.11 PROTEIN 1 217 - -
Aip09g00190 225 SUPERFAMILY SAM/Pointed domain 5 64 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00190 Aip-Chr9 1612511 1613966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00190 - - adu:107463842 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00190 09 1612511 1613966 Aip09g00190 09 1612511 1613966 ECH
Aip08g00049 08 301660 302855 Aip09g00190 09 1612511 1613966 PCT