Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00049 ATGGATTGGTTCTCATGGCTCTCAAAGACTAGCCTTGAGCCATCTCTAGTGTATGAGTATGGCCTTGCCTTTGCTCAGAATGAGCTTGAAGAAGAAGACATAATGTACTTGAACCATGAGTTCCTCCAAAGCATGGGCATCTCCATAGCCAAGCACAGGCTAGAAATCCTCAAGATTGCAAGAAAGGACAAAGGGAAGAGTAGTCCTCATCCAGTGGCAAGGCTCATGTTGGCCATCAAGAGGACAAAGAAGAGCTTCGCCAATTCCATTCGAACGTTGGTTCGACGCCAAGAATCTTCCTCTGCAATTGTGTTGGTGCCATCACCAAGGCCTAGCAGTGGTGGTTTAGGGACAAGATGGAAGAGTGCTTTGATGAGGAGGAAGATGATGCCTCCTAAGAAGCAAGAGAGACTGTTCCTCACAAATGGAAGTCCTACCGTGCTGCCTGCTCTTGAAGGGTATTCTAGTCCTGTGGTCTACCATTTCCAGAAGGAGGAAAAGATGGACCTTGGAGATGTTGATAATGATGATGATGGTTACTGGTCTGCTGCTGTTGAAGAGATCAAATGGGATACCATGTTCCAAGATCTAAAGCCAAACTGA 603 0.4643 MDWFSWLSKTSLEPSLVYEYGLAFAQNELEEEDIMYLNHEFLQSMGISIAKHRLEILKIARKDKGKSSPHPVARLMLAIKRTKKSFANSIRTLVRRQESSSAIVLVPSPRPSSGGLGTRWKSALMRRKMMPPKKQERLFLTNGSPTVLPALEGYSSPVVYHFQKEEKMDLGDVDNDDDGYWSAAVEEIKWDTMFQDLKPN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00049 200 Gene3D - 1 68 IPR013761 -
Aip08g00049 200 Pfam SAM domain (Sterile alpha motif) 20 60 IPR001660 GO:0005515
Aip08g00049 200 SUPERFAMILY SAM/Pointed domain 6 66 IPR013761 -
Aip08g00049 200 PANTHER OSJNBA0033G05.11 PROTEIN 1 200 - -
Aip08g00049 200 CDD SAM_superfamily 2 58 - -
Aip08g00049 200 PANTHER OSJNBA0033G05.11 PROTEIN 1 200 - -
Aip08g00049 200 Coils Coil 200 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00049 Aip-Chr8 301660 302855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00049 - - gmx:102660142 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00049 08 301660 302855 Aip08g00049 08 301660 302855 ECH
Aip08g00049 08 301660 302855 Aip09g00190 09 1612511 1613966 PCT