Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00162 ATGATGCTGTGCAGGAAAAGTTCTCGAAACGGCGTCGTTTCGGGATCGGTGCCGGTGTACCTGAACGTCTACGATCTTACGCCAATTAACGGTTACGCTTACTGGTTCGGACTCGGAGTGTACCATTCCGGCGTCGAAGTGCACAGTGTGGAGTATGCATTTGGGGCTCACGAGTACTCATCGACGGGGATATTCGAAGGGGAACCAAAGAGGTGTGAAGGGTTTAGATTCAGGAAGACAATACTGATTGGGAAGACAGATATGGGGCCGGATGAAGTGAGAGCGGTGATGGAAGAACTTGCAGCTGACTACAGAGGCAATGCCTACAACTTGATCACCAAAAACTGTAACCATTTCTGCAATGATACTTGTCTTAGGCTAACCGGAAATCCTATTCCCAGTTGGGTCAATCGTCTTGCCCGAATTGGTTTTATGTGCAACTGTGTTCTTCCCGTGACATTGAACTCGACCAAAGTTAGGCATCATAGAATAGAAGACAAGCCATGTGAAGCAGAGAAGCAAGCATTGAAAAGTGACTCAGACAACAACAACAAAGATAAGAACATTGCTTCAACAAATTCAACATCTACTTCTTCCCCAGCGTCCTCTACTTCCTCGGGGATTCGCAGGGGAAGAAGTAGAACTAGGCGAGCCCTTCCACCATCGTCGCCTTTGATTATTGGCTCTTCTTCTTCGTCATAA 702 0.4715 MMLCRKSSRNGVVSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVEVHSVEYAFGAHEYSSTGIFEGEPKRCEGFRFRKTILIGKTDMGPDEVRAVMEELAADYRGNAYNLITKNCNHFCNDTCLRLTGNPIPSWVNRLARIGFMCNCVLPVTLNSTKVRHHRIEDKPCEAEKQALKSDSDNNNKDKNIASTNSTSTSSPASSTSSGIRRGRSRTRRALPPSSPLIIGSSSSS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00162 233 MobiDBLite consensus disorder prediction 171 233 - -
Aip09g00162 233 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Aip09g00162 233 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Aip09g00162 233 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Aip09g00162 233 MobiDBLite consensus disorder prediction 185 209 - -
Aip09g00162 233 Gene3D PPPDE domains 13 168 IPR042266 -
Aip09g00162 233 PANTHER F23A5.4 PROTEIN 5 232 - -
Aip09g00162 233 PANTHER DESUMOYLATING ISOPEPTIDASE 5 232 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00162 Aip-Chr9 1385819 1388671 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00162 K22763 - gmx:100796813 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00162 09 1385819 1388671 Aip08g00032 08 224580 225294 ECH
Aip09g00162 09 1385819 1388671 Aip09g00162 09 1385819 1388671 ECH