Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00032 ATGGGTTGGTGGAAGGGCCGCCGGCGGAAGAAAAGGAGTTCAGGATGTGAGCCGGTGTATCTGAACGTGTACGATGTTTCCCCCACGAACGGCTACGCCTACTGGCTCGGCCTCGGAGTGTACCATTCCGGGGTGGAAGTTTACGGCGTTGAGTATGCTTTCGGGGCTCACGAGAGTTCGTGGTCGGGGATATTCGAAGGAGAACCGAAGAAGTGCGAAGGGTTCAAGTTCAGGAAGAGGGTGATGATAGGGAAGACGGGGATGGGAGAGAGTGAGGTGAAGGCAGTGATGGAGGAGCTTGGCGGAGAGTACAGAGGGAATGCATACAATTTGATAAGCAAGAACTGCAACCATTTCTCCAACGCAGCCTCTCGCAGGCTCACCGGAAAATCTATTCCCGCTTGGGTGAATCGCCTTGCCAAATTCGGGATGTGTTGCAAATGTGTTGTGCCGCCGGTGCGACTGGATGCAACCATGGCCACTACTCACCGCACCATTAATTGCGACAACATGCCAACCTGCCAATTTAATTTCCCGCCTATAGGGAAACACTAG 555 0.5369 MGWWKGRRRKKRSSGCEPVYLNVYDVSPTNGYAYWLGLGVYHSGVEVYGVEYAFGAHESSWSGIFEGEPKKCEGFKFRKRVMIGKTGMGESEVKAVMEELGGEYRGNAYNLISKNCNHFSNAASRRLTGKSIPAWVNRLAKFGMCCKCVVPPVRLDATMATTHRTINCDNMPTCQFNFPPIGKH 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00032 184 Pfam PPPDE putative peptidase domain 18 149 IPR008580 GO:0008233
Aip08g00032 184 Gene3D PPPDE domains 13 170 IPR042266 -
Aip08g00032 184 PANTHER DESUMOYLATING ISOPEPTIDASE 8 159 IPR008580 GO:0008233
Aip08g00032 184 PANTHER OS02G0788133 PROTEIN 8 159 - -
Aip08g00032 184 SMART DUF862_2a 17 156 IPR008580 GO:0008233
Aip08g00032 184 ProSiteProfiles PPPDE domain profile. 17 146 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00032 Aip-Chr8 224580 225294 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00032 K22763 - jre:109012072 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00162 09 1385819 1388671 Aip08g00032 08 224580 225294 ECH
Aip08g00032 08 224580 225294 Aip08g00032 08 224580 225294 ECH