Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03285 ATGGATTTTTGGAAGTGGGTTTTCTTTGGTTTTCTTTGTGCTGCTCTTGTTTCGAGAATTGGTGCTGTGGAGCTCGGTCGAAACCAACCTACTGAGAGAATTTCAGGTAGTGCTGGTGATGTGTTGGAAGATAATCCGGTTGGAAGGTTGAAGGTTTTTGTTTACGAACTTCCAAGCAAATATAACAAGAAAATTCTGCAAAAGGACCCAAGATGCCTTAATCATATGTTTGCTGCCGAAATCTTTATGCACCGGTTTCTCTTATCGAGTCCTGTGCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTACACCCCCGTATACACCACCTGTGACTTGACGCCAAATGGACTCCCTTTACCTTTTAAGTCACCGCGAATGATGCGAAGTGCCATACAGCTTATTTCTTCAAACTGGCCTTACTGGAACCGGACAGAAGGGGCAGATCATTTCTTTCTGACCCCTCATGACTTCGGAGCATGCTTCCATTATCAAGAAGAGAAAGCAATTGAAAGAGGAATTCTTACATTGCTAAAGCGAGCTACCTTGGTGCAAACATTTGGTCAGAGGAATCATGTATGCCTGAAAGACGGCTCAATCACAATTCCACCATATGCTCCGCCACAGAAAATATATGCCCACCTAATTCCTGAAAACACTCCCAGGTCCATTTTTGTTTACTTCCGAGGACTGTTTTATGATGTCGGAAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGGGCAGCAGTGTGGGAGAACTTCAAGGACAATCCACTGTTTGACATTTCCACTGATCATCCAACCACATACTATGAGGACATGCAAAGAGCTGTGTTTTGTTTGTGCCCGCTCGGCTGGGCCCCGTGGAGCCCACGGTTGGTCGAAGCCGTGGTTTTCGGCTGCATTCCCATCATTATTGCTGATGACATCGTTCTGCCATTCGCGGATGCTATTCCATGGGAAGAGATAGGTGTTTTTGTTGATGAGGAAGATGTCCCTAAATTGGACACTATACTAACATCAATCCCACCTGAAGTTATCTTAAGAAAGCAGAGATTGCTTGCAAACCCTACCATGAAGCAAGCTATGCTGTTTCCACAACCAGCTCAACCGGGAGATGCATTCCATCAAGTACTCAATGGCCTTGCGCGTAAGCTGCCACATGACCGGAGTATATACCTGAAACCGGGGGAGAAGTTCTTGAATTGGACTGCCGGCCCGGTCGGTGATCTCAAACCCTGGTAA 1251 0.4596 MDFWKWVFFGFLCAALVSRIGAVELGRNQPTERISGSAGDVLEDNPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFLTPHDFGACFHYQEEKAIERGILTLLKRATLVQTFGQRNHVCLKDGSITIPPYAPPQKIYAHLIPENTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTDHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPIIIADDIVLPFADAIPWEEIGVFVDEEDVPKLDTILTSIPPEVILRKQRLLANPTMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDRSIYLKPGEKFLNWTAGPVGDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03285 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
Aip08g03285 416 Pfam Exostosin family 49 344 IPR040911 -
Aip08g03285 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03285 Aip-Chr8 123866749 123870233 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03285 K20870 - gmx:100797122 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03285 08 123866749 123870233 Aip08g03285 08 123866749 123870233 ECH
Aip08g03285 08 123866749 123870233 Aip03g03344 03 109904161 109907024 PCT