Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03344 ATGGGACCTTTGAAGTGGGCTCTTCTTGGGGTTCTTCTTTCTGCTTCTCTCTTTGCGATTGATTCGGTCGAGCTGCGCAGGAACCAACCCACCGAAAGGATATCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAAGTTTTTGTTTATGAACTTCCAAGTAAATATAATAAGAAAATTCTGCAAAAGGACCCGAGATGCCTCAACCATATGTTTGCTGCCGAGATCTTTATGCACCGGTTTCTGTTATCTAGCCCTGTCCGAACTCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATATACTACCTGTGACTTGACACCAAATGGTCTCCCTTTGCCCTTCAAATCACCACGAATGATGAGAAGTGCCATACAGCTTATTTCTGCAAATTGGCCATATTGGAACCGGACAGAAGGTGCTGATCATTTCTTTGTAGTTCCTCATGACTTTGGGGCATGTTTTCATTATCAAGAAGAAAAGGCAATTGAGAGAGGGATTCTTCCGCTGCTACAGCGTGCAACATTGGTTCAAACATTTGGACAGAGGAATCATGTATGCTTGAAAGAGGGCTCAATCACCATTCCTCCATATGCTCCACCACAAAAAATGCATACACACTTAATTCCTGATAAGACCCCCAGGTCCATTTTTGTTTACTTCAGAGGACTTTTTTATGATGTTGGAAATGACCCTGAAGGTGGATACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAACTTTAAGGACAATCCATTATTTGACATTTCCACCGAACATCCAACCACATACTATGAGGACATGCAACGAGCCGTGTTTTGTTTGTGTCCGCTTGGATGGGCCCCTTGGAGCCCAAGATTGGTTGAGGCTGTGATATTTGGTTGCATCCCTGTTATTATTGCAGATGATATTGTCCTGCCATTTGCTGATGCAATTCCATGGGAAGAGATTGGGGTGTTTGTCGATGAGGAGGATGTCCCTAAGTTGGATACTATACTCACATCCATCCCACCAGAAGTTATACTAAGGAAACAAAGATTGCTTGCTAACCCTTCCATGAAGCAAGCTATGCTTTTCCCGCAACCTGCTCAACCGGGAGATGCTTTCCATCAAGTTTTGAATGGCCTTGCCCGGAAATTGCCACACGACAAGAATGCGTTCTTGAAACCAGGGGAGAAGGTCTTGAATTGGACTGCTGGACCTGTGGGTGACCTTAAACCTTGGTAG 1251 0.4452 MGPLKWALLGVLLSASLFAIDSVELRRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISANWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVDEEDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDKNAFLKPGEKVLNWTAGPVGDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03344 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
Aip03g03344 416 Pfam Exostosin family 49 344 IPR040911 -
Aip03g03344 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03344 Aip-Chr3 109904161 109907024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03344 K20870 - gmx:100797122 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03285 08 123866749 123870233 Aip03g03344 03 109904161 109907024 PCT