Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03195 ATGGTAGACTCCTCCTCCACCGCCTCCAGAAAATCCGAGAACGGCGGAACCTCCTCCAAACCTCCGTCTCCACCTCCGCCGCAACCGGGGGATGGTGGAGAAAGGACGGTTAAGAAGTTGCGGTTGTCGAAGGCGCTGACGATTCCCGATGGGACAACTGTCTACGACGCCTGCCGGAGAATGGCAGCCCGCCGCGTTAACGCCGTCTTGCTCACTGATTCCAATGCTCTCCTCTCCGGAATTCTCACTGACAAGGATGTGGCTAGTAGAGTTATTGCGGAGGGGCTGGTGCCAGAGCAAACACCGGTCTCCAAAGTTATGACACGCACTCCTATATTTGTCACTTCTGATACACTCGCCATCGAAGCTCTTCAGAAGATGGTCCAAGGTAAATTCAGGCACTTGCCTGTTGTGGAAAATGGTGAAGTCATTGCCATGCTGGATATCACCAAATGTCTATACGATGCCATATCTAGGATGGAGAAGGCAGCTCAGCAAGGGAGTGCCATTGCAGCTGCAGTTGAGGGGGTGGAGTTGCAAAGGGGTAGTAATGGATCTGCTGCAAGTGCTTTCATAGAAACATTGAGGGAGCGCATGTTTAAGCCTTCCTTGTCAACTATAGTTGGTGAAAATTCAAAGGTTGCTATTGTATCATCATCAGATCCTGTCCAAGTAGCTGCAAAAAAGATGCGGGAGTTGCGTGTCAATTCAGCTGTGATTGCAAATGAAACCAAGCTTCAAGGGATACTTACTTCCAAGGACATCCTTATGCGTGTTGTGGCTCAAAATCTTGCTCCTGACACCACTCCAGTAGAAAAGGTAATGACTTCAAACCCTGAACATGCATCATTAGAGACAACAATTCTTGATGCACTCCATATGATGCATGATGGGAAGTTCTTACATCTTCCAGTGGTGGACAAAGACGGCAACATTGCTGCTTGTTTGGATGTTTTGCAAATAACAACTGCTGCAATTTCTCTGGTTGAAAGTAGCTCTGGAACTGTAAATGATATGGCAAACTCAATTATGCAAAAATTTTGGGACTCAGCTTTAGCGCTAGAGCCACCAGATGATTATGACACTCAGAGTGAAGTTTCCGGGATAATGAATTCAGATGGAGCAGATACTGCAAAGTCTACATACCAAACTGTAGGTCATGGAAATTCATTTACTTTTAAATTTGAGGATCCTAATGGTCGAGTGCATCGAGTCACCTGTGGTGAGTGA 1230 0.4683 MVDSSSTASRKSENGGTSSKPPSPPPPQPGDGGERTVKKLRLSKALTIPDGTTVYDACRRMAARRVNAVLLTDSNALLSGILTDKDVASRVIAEGLVPEQTPVSKVMTRTPIFVTSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDITKCLYDAISRMEKAAQQGSAIAAAVEGVELQRGSNGSAASAFIETLRERMFKPSLSTIVGENSKVAIVSSSDPVQVAAKKMRELRVNSAVIANETKLQGILTSKDILMRVVAQNLAPDTTPVEKVMTSNPEHASLETTILDALHMMHDGKFLHLPVVDKDGNIAACLDVLQITTAAISLVESSSGTVNDMANSIMQKFWDSALALEPPDDYDTQSEVSGIMNSDGADTAKSTYQTVGHGNSFTFKFEDPNGRVHRVTCGE 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03195 409 MobiDBLite consensus disorder prediction 1 35 - -
Aip08g03195 409 CDD CBS_pair_MUG70_2 211 327 - -
Aip08g03195 409 SUPERFAMILY CBS-domain pair 34 152 IPR046342 -
Aip08g03195 409 ProSiteProfiles CBS domain profile. 107 162 IPR000644 -
Aip08g03195 409 ProSiteProfiles CBS domain profile. 275 331 IPR000644 -
Aip08g03195 409 ProSiteProfiles CBS domain profile. 41 99 IPR000644 -
Aip08g03195 409 CDD CBS_pair_MUG70_1 42 158 - -
Aip08g03195 409 Pfam CBS domain 103 148 IPR000644 -
Aip08g03195 409 Pfam CBS domain 271 312 IPR000644 -
Aip08g03195 409 Pfam CBS domain 211 258 IPR000644 -
Aip08g03195 409 Pfam CBS domain 43 90 IPR000644 -
Aip08g03195 409 SMART cbs_1 213 260 IPR000644 -
Aip08g03195 409 SMART cbs_1 44 92 IPR000644 -
Aip08g03195 409 SMART cbs_1 110 154 IPR000644 -
Aip08g03195 409 SMART cbs_1 278 326 IPR000644 -
Aip08g03195 409 PANTHER CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN 25 408 - -
Aip08g03195 409 MobiDBLite consensus disorder prediction 1 18 - -
Aip08g03195 409 Gene3D - 201 346 IPR046342 -
Aip08g03195 409 SUPERFAMILY CBS-domain pair 212 323 IPR046342 -
Aip08g03195 409 ProSiteProfiles CBS domain profile. 210 268 IPR000644 -
Aip08g03195 409 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 25 408 - -
Aip08g03195 409 Gene3D - 30 172 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03195 Aip-Chr8 122681779 122690835 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03195 - - lja:Lj1g3v1363200.2 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03195 08 122681779 122690835 Aip08g03195 08 122681779 122690835 ECH
Aip03g03258 03 106299673 106303922 Aip08g03195 08 122681779 122690835 PCT