Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03193 ATGGACCGAAGGAGTTGGCTATGGCGAAAGAAAAGTCCCGGCGAAACAGAGAGCTCTGGATCACAATCGCCTCATTCGGAACGATTCTCTGATGATCAGGTATATGGCACACAAATGAATCAATCAGCAGAAGTCATGTCTAAGGTTGAGCCAAATGAAGAAGAAATATCTGATGTGAAGATACTAACAGAAAGATTATCTTCTGCTCTCTTAGAGATTAGTACAAAAGAAGAATTGGTACAGCAACATGCCAAAGTTGCTGAAGAAGCTGTCTCAGGGTGGGAGAAAGCAGAAAATGAATTGTCAAGTTTGAAGAAACAACTTGATGATGCAAAGCAGAATAACTCGGTTCTTGAAGACCGAGTTAGTCACCTTGATGGAGCACTCAAGGAGTGTATGAGGCAGCTTAGACAAGCTAGAGAAGATCAAGAGAAGAAGAAGATCCATGAAGTTGCTCCGAACGGAGGGGAATCCGAGAAGTCTGAGATTGAGACTCAACTTCAGCAGAGGCTTGAGGATGTGGAGGAAGAAAATTCAACTCTTAAAGCCGAGCTTCATTCTCGACTCGAAGAACTAGAACTCAGAATAACTGAGAGGGATTTGAGTACACAAGCTGCTGAAGCAGCAAGCAAACAACACTTGGAGAGTATAAAGAAGGTAGCTAAGCTTGAAGCTGAGTGCCGAAGACTTAAGGCCATAGCTCGAAAAACCTTATCTGCCAATGATCAAAGGTCTATGACTGCTTCTTCAATCTATGTAGAGTCTTTAACAGATAGCACTTCAGATAGTGGAGAGAGACTAATGGCAGTTGAAACCGATATGCGCAAATTAGGCGCTTGGGAAACAAACGAACATGAGCCGAGCCATTCTGATTCGTGGGCTATAATTGCAGAAGTTGAGCAGTTAAAAAACTCTGCTGGAAAGAATCTTATGGTACCTTCAACTGAGATCAATTTGATGGATGATTTCCTTGAAATGGAAAGGCTAGCTGCAATGCCAGATACAGAAAGTGGAAGTGGTTTTATTGTTGTAGGACATTCGTCGAACCGGCCTAATGTTGAGCATGGTTCAATGAAATCTGGAGTGGAAGCATTGGTTCAAAAGAATGCTGAATTGGAAAAGAAGCTAGAGATGGTAGAATCACATAAGCTTGAGTTAGAGACAAGTTTAATTGAGTGCCAGAAGCAGCTCGTGGTGTCAGAGAATCGAATAAAGGAAGCAGAGTTGAAGGTAGAAGAGCTTCAAACTCAGTTAGACCTTGTGAAAAAATCACATGAAGAAGCATGTGAAGAACTAAAAGCAAGCCAAGAGAAGAATGAGATGGCTGAGTCAAAACTGAAAGTTGCTGAAACTGAGGTGCAAGAATTGATTTCAAAAATAAATTCATTGGATGAAGAGATTGAAAAGGAGAGAGCTTTATCTGCTGAGAATTTGGCCAAGTATGAAAAGTTGGTGGAAGAGATTGAAAAAGAGAGAGCTTTGTCTGCTGAGAATTTGTCCAAGTATGAGAAACTGGAGGAAGAGATTGAAAAAGAAAGAGCTTTGTCTGCTGAGAATTTGGCCAAGTATGAGAAATTGGAGGAAGAGATTGAAAAAGAAAGAGCTTTGTCTGCTGAGAATTTGTCCAAGTATGAGAAATTAGAGGAAGAGATTGAAAAGGAGAGAGCAATGTCTGAAAAAGAGAGAGCTTTGTCTATGGAGAATTTGGCTAAGTGTGAGAAGTTGGAGAAAGAGATATTGATTATGAAGTATGAAGATGGACTCAATCGAGACGCCGAGATACCGCACGGCGAAGGTGTTAGCAGTGAGATACAGTTAAGACAGGAGAAGGAGCTTGCATTGGCAGCTAGTAGATTTTCTGAGTGCAGGAAAACAATTGAATCACTTGGACAACAATTAAAGTCCCTTGCAACATTAGAAGATTTTCTTGTTGATTCAGATAAGCCTATGGACTTGGCTTGTGAAGCTGTTACACCAAATAATGGTGTTGAGAAGTTGAAATTACATAATAATAATAATAAAAACAACAAAATCAGTGATTTGAGTTTGGCCAAAAGAGATTCTGAACTATCAGTTTCAGTAATTAGTAGTCAATCTGTTAATAATGTGAAAAATCTCAGTAGTTTTGGTAGGTTCCACCCAAGAAGTAAGAGTGTCAGCAAAAGAGGAACTCATTAA 2178 0.4008 MDRRSWLWRKKSPGETESSGSQSPHSERFSDDQVYGTQMNQSAEVMSKVEPNEEEISDVKILTERLSSALLEISTKEELVQQHAKVAEEAVSGWEKAENELSSLKKQLDDAKQNNSVLEDRVSHLDGALKECMRQLRQAREDQEKKKIHEVAPNGGESEKSEIETQLQQRLEDVEEENSTLKAELHSRLEELELRITERDLSTQAAEAASKQHLESIKKVAKLEAECRRLKAIARKTLSANDQRSMTASSIYVESLTDSTSDSGERLMAVETDMRKLGAWETNEHEPSHSDSWAIIAEVEQLKNSAGKNLMVPSTEINLMDDFLEMERLAAMPDTESGSGFIVVGHSSNRPNVEHGSMKSGVEALVQKNAELEKKLEMVESHKLELETSLIECQKQLVVSENRIKEAELKVEELQTQLDLVKKSHEEACEELKASQEKNEMAESKLKVAETEVQELISKINSLDEEIEKERALSAENLAKYEKLVEEIEKERALSAENLSKYEKLEEEIEKERALSAENLAKYEKLEEEIEKERALSAENLSKYEKLEEEIEKERAMSEKERALSMENLAKCEKLEKEILIMKYEDGLNRDAEIPHGEGVSSEIQLRQEKELALAASRFSECRKTIESLGQQLKSLATLEDFLVDSDKPMDLACEAVTPNNGVEKLKLHNNNNKNNKISDLSLAKRDSELSVSVISSQSVNNVKNLSSFGRFHPRSKSVSKRGTH 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03193 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 488 - -
Aip08g03193 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 526 551 - -
Aip08g03193 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 559 682 - -
Aip08g03193 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 484 508 - -
Aip08g03193 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 501 530 - -
Aip08g03193 725 Coils Coil 206 226 - -
Aip08g03193 725 MobiDBLite consensus disorder prediction 12 33 - -
Aip08g03193 725 Pfam Filament-like plant protein, long coiled-coil 165 238 IPR008587 -
Aip08g03193 725 Pfam Filament-like plant protein, long coiled-coil 76 154 IPR008587 -
Aip08g03193 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 484 508 - -
Aip08g03193 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 526 551 - -
Aip08g03193 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 488 - -
Aip08g03193 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 501 530 - -
Aip08g03193 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 559 682 - -
Aip08g03193 725 Coils Coil 362 564 - -
Aip08g03193 725 Coils Coil 94 121 - -
Aip08g03193 725 MobiDBLite consensus disorder prediction 138 179 - -
Aip08g03193 725 Coils Coil 164 191 - -
Aip08g03193 725 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03193 Aip-Chr8 122657398 122661226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03193 - - aip:107613274 1303.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03193 08 122657398 122661226 Aip08g03193 08 122657398 122661226 ECH
Aip03g03414 03 111885128 111889211 Aip08g03193 08 122657398 122661226 ECH