LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g03414	ATGGACCGAAGGAGTTGGCTATGGCGCAGGAAGTCATCGGAGAAAAGTCCTGGCGAAACGGAGAGTTCGGGATCAATATCCTCTCTTTCAGAGAGATTCTTTGATGATCAGGTGTATGCAACCCAAGCTACTCAATCACCAGAAGTCACATCCAAAGCTCCACCACCAAATGAAGAAGAACATAGTACACCAAAGAAGAATAAAGAAGAAGGTACTGGTGTGAAGGCTCTAAATGACAAACTTGCAGCCGCTCTCCTTAATATTAGTGCCAAAGAAGACTTGGTAAAACAGCATGCTAAAGTTGCTGAAGAAGCTGTCTCAGGTTGGGAGAAGGCTGAAAAAGAAGTGGTGTCTTTAAAGCAACAACTTGACACTGCAAAGCAAAAGAACTCAATTCTTGAAGACCGAGTTGGTCATCTTGATGGGGCACTCAAAGAGTGTATGCGGCAGCTTCGACAAGCTAGAGAGGAGCAAGAGCAAAAGATTGTTGAAGCTATGGCAATTAAATGTCATGACTGGGAGCGGAAAAGAGCTGAGCTTGAGGGAAAGGTTGTGGAACTCGAAGCTTCACTTCAAACAGCTAAAGCAGATGCTACTGCATCAATTCGTTCTGACCTTCATCAGAGACTTGAGGCTATGGAGAAAGAGAATTCAAGTCTTAAACTTGAGCTTGAATCTCGGCTTGAAGAATTAGAATACAGGATTGCTGAAAGGGACTTAAGTGCCGAGGCTGCTGAAATTGCAAGCAAGCAACATTTGGAGAGTGTCAAGAAGGTTGCTAAGCTTGAAGCTGAGTGCCGTAGACTGAAAGCAATTTCTCGAAAAGCAATTCCCATTAACGATCACAGGTCTTTGGCTGCATCTTCAGTTTATGTTGAGTCATTCACAGATAGTATGTCAGATAGTGGAGAGAGGCTACTTGCAGTTGAAAATGACATGCGTAAATTAGGGGGCTGGGAGATCAATGAACACGGGCCAAGCCGTAGCGAATCATGGTCATCAAATTTAGTAACGGAACTTGATCAATTAAAGAACCAAAAGGCTAATGGGAAAAGCCATATGGCCCCTTCAACTGAGATCAACCTCATGGATGATTTCCTTGAGATGGAAAAGCTTGCTGCATTGCCGGATGCAGAAAGTGGAAGCAATTCTGTTAAAGCAATCAGTGTTTGCCAGGGTACGATGAAAGCTCAAGTTGAAGCCACCATTCAAAAGAACAGTGAGTTGGAAAAGATGCTACAGAAAATGGAGGCTGATAAACTTGAAGTACAGACTAGCTTAACCAAGTGCCAAATGCAGCTTGAGGCATCACATAGTCGGATTAGAGAAGCAGAGTTGAAGGTAACAGAGCTTCGAACTCAGTTAGCTCTTGCCAACAAATCAAATCAAGAAACATATGAAGAACTAAAAGCAACCAAAACTAAGAAGGAAGTAGCCGAGTCAAAACTTGGAATTGCTCAAAGTGATATAGAAGAGTTGGCTGCAAAAATCTGTTCCTTGGAGGAAAAGATTCAGAAGGAGCAAGCTTTGTCTATGGAGAACTCGATCAAGTTCCGGAGACTGGAGGATGAGCTTTCAAAAACAAAGCAGGAAGTTCAACTTCAGCAAGACACCGCAGCTTTGCAAAGGGAAAATGTTAATCGCAAGTCGAAGTTAAAGCAGGAGAAGGAACTTGCATTGGCTGCTAGTAGATATGCTGATTGCAAGAAAACCATTGCATCTCTTGGACAGCAGTTGAAGTCCCTTGCAACCTTGGAAGACTTCCTACTTGATTCAGGCAACATTAATGAGTTGACTAATGAAGTTACACAAGCTCAACAAAATGGTGTTGAACAATTGAAATTGCACCACACTGATATGTGTCTGTCCAAAAGAGGTTCCGAGTCGCCAATTTCGCTTAATCCAACATCCATCGCCAACGAGAAGAGCCGCCATAATAGTAACCTTGGTAAGTTGGTTCCCCCTAGAAGCAAGAGTGTAAGCAGGCGAGGAAGAATCTGA	2001	0.4318	MDRRSWLWRRKSSEKSPGETESSGSISSLSERFFDDQVYATQATQSPEVTSKAPPPNEEEHSTPKKNKEEGTGVKALNDKLAAALLNISAKEDLVKQHAKVAEEAVSGWEKAEKEVVSLKQQLDTAKQKNSILEDRVGHLDGALKECMRQLRQAREEQEQKIVEAMAIKCHDWERKRAELEGKVVELEASLQTAKADATASIRSDLHQRLEAMEKENSSLKLELESRLEELEYRIAERDLSAEAAEIASKQHLESVKKVAKLEAECRRLKAISRKAIPINDHRSLAASSVYVESFTDSMSDSGERLLAVENDMRKLGGWEINEHGPSRSESWSSNLVTELDQLKNQKANGKSHMAPSTEINLMDDFLEMEKLAALPDAESGSNSVKAISVCQGTMKAQVEATIQKNSELEKMLQKMEADKLEVQTSLTKCQMQLEASHSRIREAELKVTELRTQLALANKSNQETYEELKATKTKKEVAESKLGIAQSDIEELAAKICSLEEKIQKEQALSMENSIKFRRLEDELSKTKQEVQLQQDTAALQRENVNRKSKLKQEKELALAASRYADCKKTIASLGQQLKSLATLEDFLLDSGNINELTNEVTQAQQNGVEQLKLHHTDMCLSKRGSESPISLNPTSIANEKSRHNSNLGKLVPPRSKSVSRRGRI	666

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g03414	666	Coils	Coil	109	136	-	-
	Aip03g03414	666	MobiDBLite	consensus disorder prediction	1	75	-	-
	Aip03g03414	666	MobiDBLite	consensus disorder prediction	625	654	-	-
	Aip03g03414	666	Coils	Coil	434	496	-	-
	Aip03g03414	666	PANTHER	FILAMENT-LIKE PLANT PROTEIN 4	1	629	-	-
	Aip03g03414	666	MobiDBLite	consensus disorder prediction	54	75	-	-
	Aip03g03414	666	Pfam	Filament-like plant protein, long coiled-coil	91	200	IPR008587	-
	Aip03g03414	666	Pfam	Filament-like plant protein, long coiled-coil	384	584	IPR008587	-
	Aip03g03414	666	Pfam	Filament-like plant protein, long coiled-coil	193	278	IPR008587	-
	Aip03g03414	666	Pfam	Filament-like plant protein, long coiled-coil	325	380	IPR008587	-
	Aip03g03414	666	PANTHER	FILAMENT-LIKE PLANT PROTEIN	1	629	-	-
	Aip03g03414	666	Coils	Coil	140	197	-	-
	Aip03g03414	666	Coils	Coil	518	538	-	-
	Aip03g03414	666	Coils	Coil	203	230	-	-
	Aip03g03414	666	MobiDBLite	consensus disorder prediction	18	52	-	-
	Aip03g03414	666	MobiDBLite	consensus disorder prediction	624	666	-	-
	Aip03g03414	666	MobiDBLite	consensus disorder prediction	1	17	-	-
	Aip03g03414	666	Coils	Coil	399	426	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip03g03414	Aip-Chr3	111885128	111889211	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g03414	-		-	gmx:100796048	830.476

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip03g03414	03	111885128	111889211	Aip03g03414	03	111885128	111889211	ECH
	Aip03g03414	03	111885128	111889211	Aip08g03193	08	122657398	122661226	ECH