Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03192 ATGGGGTTGTTCAAAGCTAAAGGAACTGTTTACAAGGCAGTGAAAGATGTGGACTTGGGTCCTTATAGCACTGAACACTATCTCCAAGCCAATGTCAAAGCGCCACGAATGACTGGGATTTTGATCAAGATTTTCATTGCTATCTTGGAATGTCCCATACTTGGGACCTTGCTATTGTACATATTGAAAGGAAACAATCTCATTCATGATCTTATTACAAATGTGGATTTACAAGAGTCACCTCTCTTTGTTCCTTTACATGATTTTGAAGATAGGAAAGAGAAAGAAGTGAAATGCATAGATTCAAGTTCATCTCCACCAGAGAAAGTTCAACTTGCAATTGATTGTTTGCCTAAATCTTCTTCTGAAGAACAAGAAAATTCATTCAGTAGATGGACAATAATGGATTATTACAAAGCCTATAGCTCAGGAAACACAACACCATCAATGGTTGCTGAAAAATTTATAGCTGCCGTTAATGAATCTGTGAAACCTCCACTCCAAATGGGATTCTTTATTGACTACAACACTGATGATATATTGAGACAAGCAAATGAATCAACTCTTAGGCATAAAGCAGGGGAAGCTATATCTGTGTTAGATGGAGTACCTGTTGCTATAAAAGATGAAATAGATTGTTTGCCATATCCAACAACAGGGGGAACAAAGTGGCTGCACAAAGAAAGGCCATGTGAAGACGATGCTTGCTGCGTTAAGCGTCTGAGACTATGCGGCGCAATCATTGTTGGGAAGACTAATATGCATGAACTTGGATCTGGAACTAGTGGGATTAATCCACATTATGGGCCTGCTAGGAACCCTTATGATAAGAATAAGATTGCAGGAGGTTCTTCAAGTGGTTCTGCTGCTGTGGTTTCTGCAGGATTGTGCCCTGTTGCCCTTGGGGTTGATGGTGGAGGATCTGTAAGGATGCCAGCAGCTCTTTGTGGTGTTGTTGGTTTGAAACCGACTTTTGCTCGCATACCTCATGCCGGAGTTCTACCTCTAAACTGGACAGTTGGCATGGTTGGGATACTAGCAAGCACAGTTGAGGATGCAATGATTGTTTATGCAGTTATCAGTGGTGAAATTCCATCCGATAAGCCGTCCGGTACACCATCCAAGATAAACCTCCCACTGCTGAGCATGACAAAGTCTTTATCAGGCATAAAGTTGGCAAAATATGGAAAGTGGTTTGATGATTGCAGTGATGAAGTCAAATTATGTTGCTCCCAAGCTTTGCTCAAACTCCAGAATCATTATAATTGGAAGACTCTAGATGTCACCATACCAGAGATAGAAGTGATGCGCCTCGCACATTACACGACGATTGGATCCGAATGCTCGGCTTCACTTGGTTCCTTGAGAGAAAAGAATATTGCAGAATTTGGAGGGGATGCAAGGGTAGCACTAAGCATTTATAGCTCCTTCAGCAGCTTGGAGTATCTTAATGCTCAAAGGATCAGGAACCGGCAGTTGCAACTTCACATGAAAATATTTGCTGAGGCTGATGTGATTGTGTCACCAACAACAGGTGTGACTGCATATTCAATTCAAGATGATGCCCTCAAGACTGGTGAACTTGATTACATCAATGGAGCTGCACTTGTTCGTTATTCCATAGCTGGAAACTTTCTTGGATTTCCAGCAGTCACTGTTCCGGTTGGATATGATAAATTGGGGTTACCTATTGGTCTTCAGTTTATTGGAAGGCCTTACTCTGAAGCAACATTGATTCACTTGGCATTTGCTATGCAGGCCATCTCCTTGTACAAAAAGCCAGGGCAATACTATGATTTGCTTAGAAGATAA 1812 0.4161 MGLFKAKGTVYKAVKDVDLGPYSTEHYLQANVKAPRMTGILIKIFIAILECPILGTLLLYILKGNNLIHDLITNVDLQESPLFVPLHDFEDRKEKEVKCIDSSSSPPEKVQLAIDCLPKSSSEEQENSFSRWTIMDYYKAYSSGNTTPSMVAEKFIAAVNESVKPPLQMGFFIDYNTDDILRQANESTLRHKAGEAISVLDGVPVAIKDEIDCLPYPTTGGTKWLHKERPCEDDACCVKRLRLCGAIIVGKTNMHELGSGTSGINPHYGPARNPYDKNKIAGGSSSGSAAVVSAGLCPVALGVDGGGSVRMPAALCGVVGLKPTFARIPHAGVLPLNWTVGMVGILASTVEDAMIVYAVISGEIPSDKPSGTPSKINLPLLSMTKSLSGIKLAKYGKWFDDCSDEVKLCCSQALLKLQNHYNWKTLDVTIPEIEVMRLAHYTTIGSECSASLGSLREKNIAEFGGDARVALSIYSSFSSLEYLNAQRIRNRQLQLHMKIFAEADVIVSPTTGVTAYSIQDDALKTGELDYINGAALVRYSIAGNFLGFPAVTVPVGYDKLGLPIGLQFIGRPYSEATLIHLAFAMQAISLYKKPGQYYDLLRR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03192 603 Gene3D Amidase signature (AS) domain 134 590 IPR036928 -
Aip08g03192 603 SUPERFAMILY Amidase signature (AS) enzymes 128 588 IPR036928 -
Aip08g03192 603 PANTHER TRANSAMIDASE 1 603 IPR000120 GO:0003824
Aip08g03192 603 Pfam Amidase 177 578 IPR023631 -
Aip08g03192 603 ProSitePatterns Amidases signature. 282 313 IPR020556 -
Aip08g03192 603 PANTHER FATTY ACID AMIDE HYDROLASE-LIKE PROTEIN 1 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03192 Aip-Chr8 122651633 122656522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03192 7 601 Acyl Lipid Metabolism Gene Families AT5G64440 44.426 1.37e-169 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03192 - - gmx:100775876 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03415 03 111917005 111921190 Aip08g03192 08 122651633 122656522 ECH
Aip08g03192 08 122651633 122656522 Aip08g03192 08 122651633 122656522 ECH