Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03415 ATGGGTTTGTTCCAAGATAAGCGTGTGGTTTACAAGCCTGTGAAGGATGTTAACTTAGGCCCTCATAGCACTGAATTCTATTTCCATGACAATGTTAAAGCACCACGCATGACTGGCATTGTAGTCAAGATTTTCACTCTCTTGTTGGAAACTCGAGTATTTAGAACCTCCATATTGTATCTACTCAAGAGGAATAATCTTTTTCACAAGCTTATTACAAATGCAGATTTGGAAGATTCACCCCTCTATGTTCCCTTACATCACTTTGAAGACCACAGAGAACAAGAAGTCAAATGCATAGATCATGCTTTAACTCCACAAGAGCAAGTTCAGCTTTCAATAGATTGCTTGCCTACATCTTCATCAGAAGATGATGATGCACTTAATGGAAAAAATTCTTCATTCTGTCGGTGGACAATAATGGATTATTCTAGAGCCTATAGCTCAGGAGATATAACACCACGCATGGTCGCAGAACGCTTTATAGCTGCTGTTGCTGAATCTTCAAAAGCTCAACTCCAAATGGGATTCTTTATTAACTACAACACTGAAGATATACTGAGGCAAGCAGATGAATCAACTCTTAGATATCAGAGAGGGGAACCTATCTCTGTCTTAGATGGAGTCCTAGTCGCTATCAAGGATGAAATAGATTGCTTGCCCTATCCAACCACAGGAGGTACAAAGTGGTTGCACAAAGAAAGGCCTTGTGCAGATGATGCTTGCTGTGTCGGGCGGCTAAGGTTATGTGGCGCCATACTTTCTGGGAAGACTAATATGCAAGAACTAGGGGCTGGAACTAATGGAATCAATCCGCATTATGGGGCTACTAGGAACCCATACGATTCGAATAAGATCGCTGGAGGTTCTTCGAGTGGATCTGCTGCTGTGGTGTCTGCAGGGCTATGCCCTGTTGCCCTTGGTGTGGATGGGGCAGGATCTGTGAGAATTCCTGCAGCTCTTTGTGGTGTTGTTGGTCTGAAACCAACTTTTGGTCGTGTACCTCATTCCGGAGTTCTTCCTCTAAACTGGACAGTTGGGATGGTGGGAATACTAGCAGGCACAGTTGAGGATGCATTGATCACTTATGCAGCTATCTCTGGTGAAATTCCCTCCAATCAGCCATCCAAAATACCTATCAATCTCCCACTGCTGCCAATGACAAAGTCTATATCTGACATCAAGTTGGCAAAATATGGAACGTGGTTCAATGATTGCAGTGATGATATCAGAAGATGCTGCTCTCATGCTTTGAACAAACTTCAGGATCTTTATGGTTGGGAGACTGTAGATGTTACTATACCAGACATAGAAGTAATGTTCCGAGCACATTATCTAACAATCGGATCAGAGTGCTCCACTTCGCTTGATTCCTTTCGAGAAAAGAATTTTGCAGAATTAGGATGGGATACAAGGGTAGCACTTAATTTCTATAGTGCTTTCAGCAGCATGGAGTATATCAAAGCTCAAAAAATTAGGAATCGGCAGTTACAGTTTCACAAGAAAATATTGGCCGAGGCAGATGTCATTGTGTCACCAACAACAGGTGTCACTGCAAACCCAATTCAAGAGGATGCTATAAAGACTGGTGACTTTGACTACCCAAATGCAGCTGCACTTGTTCGGTATTCCATATCAGGAAACTTTTTGGGACTTCCTGCGGTGACTATTCCAGTTGGATACAGTGAATTGGGTTTGCCTATTGGTCTTCAATTTATAGGAAAGCCTTGGGCTGAAGCAACACTCATTCACTTGGCATTTGCAATGCAGGCCATCTGCATGCCGGAATACAGAAAGCCAGCAGTTTTCTATGACTTGCTAAGAGAAAATGAAAGTTAA 1839 0.4258 MGLFQDKRVVYKPVKDVNLGPHSTEFYFHDNVKAPRMTGIVVKIFTLLLETRVFRTSILYLLKRNNLFHKLITNADLEDSPLYVPLHHFEDHREQEVKCIDHALTPQEQVQLSIDCLPTSSSEDDDALNGKNSSFCRWTIMDYSRAYSSGDITPRMVAERFIAAVAESSKAQLQMGFFINYNTEDILRQADESTLRYQRGEPISVLDGVLVAIKDEIDCLPYPTTGGTKWLHKERPCADDACCVGRLRLCGAILSGKTNMQELGAGTNGINPHYGATRNPYDSNKIAGGSSSGSAAVVSAGLCPVALGVDGAGSVRIPAALCGVVGLKPTFGRVPHSGVLPLNWTVGMVGILAGTVEDALITYAAISGEIPSNQPSKIPINLPLLPMTKSISDIKLAKYGTWFNDCSDDIRRCCSHALNKLQDLYGWETVDVTIPDIEVMFRAHYLTIGSECSTSLDSFREKNFAELGWDTRVALNFYSAFSSMEYIKAQKIRNRQLQFHKKILAEADVIVSPTTGVTANPIQEDAIKTGDFDYPNAAALVRYSISGNFLGLPAVTIPVGYSELGLPIGLQFIGKPWAEATLIHLAFAMQAICMPEYRKPAVFYDLLRENES 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03415 612 SUPERFAMILY Amidase signature (AS) enzymes 134 592 IPR036928 -
Aip03g03415 612 ProSitePatterns Amidases signature. 288 319 IPR020556 -
Aip03g03415 612 Gene3D Amidase signature (AS) domain 140 593 IPR036928 -
Aip03g03415 612 Pfam Amidase 172 582 IPR023631 -
Aip03g03415 612 PANTHER TRANSAMIDASE 1 609 IPR000120 GO:0003824
Aip03g03415 612 PANTHER FATTY ACID AMIDE HYDROLASE-LIKE PROTEIN 1 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03415 Aip-Chr3 111917005 111921190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03415 1 610 Acyl Lipid Metabolism Gene Families AT5G64440 42.122 1.73e-163 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03415 - - gmx:100784932 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03415 03 111917005 111921190 Aip08g03192 08 122651633 122656522 ECH
Aip03g03415 03 111917005 111921190 Aip03g03415 03 111917005 111921190 ECH