Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03138 ATGTTACCTGAATCCTATGATTCAAGCTTGCTCCTATCTCTCCCTGATGATGTTTTCGCCATTGTTTCTCGGTTCCTTTCACCGAGAGATGTGTGTAGCTTGGGCTTGTGCTGTAAGAGCTTGAATGCTCTTGTGACTTGTGAAAAAATCTGGCTCACTCAATGTGATGTTTTGGGCATAGTGCCCCATAAAGACCTTGTTGAGTGGAGAAATGGTGTGTGTTCTTACAAGGCTCTATGCCGTTTCCTTCTCAGTGTTCAACCACTGATTGGATTATGGGTTCATCAGAATCCGGAGCTAGGCAATGTGGTGTATGTAATGCCCGGATTTATGTCGGTTGTTGGTTGCAGGGTAATCCCTCAGGAGCTTGGTCCATTGGGCATTGAAGATGGCCCAATCCTCTGGGCATGTGTCTTTGAAATTATTGCTGATTTTGATGGTTCGACTGTATTTTTCCTTCATGGTAGGGAGAAGGGTATTGATTATATATATCCTGGTTCTGTCAAGCCTGTACAGAAATCTTGCAATGTGCTGTTGCTCGAGGTCGAACCCGGACAACAACAAAAGAATGTTGGTGCTTTGTTGCAGAGTAAAAGCTTTGTGCACCATTCGGGTGTAGAGTTATCAAGGAATGTTTGTCGGTCGAATAGTGACATTTCTAGGTCACAAAGGGTGAATGGAAATAATGAGACAATGGTTCCTTTCAGCAAATTAGCATTTAGTGATAGAAGAAAGTTGCTAGAGGTAACTACTAGCCAAGTCCGGCAAAGGGTTCCTGATATGGCAATTGGACCATTGTTTCCCGGGTTAAGGGATGATGATGAAAACTTTCAGAAGGAGTTGGTCCTCTTATGGGAAAGACGATCGTTCCTTAGTCAAATCTACGAGCTTGGTAGTAAGCAGCTGGTAAATAGAAGTTCTCAAGATAGAGTTGGTCCAACACACTTAGAACTTGATGGTATTGGAAAGAGTTTTGATTGTTCAAGAGCAATTTGTAACCCTTTGCCGGAGGAGGATAGTCGCATCAAAAGAAAAGGTCTTCGTGGATATTTCTTGGATGGCCTTAAACATATGCTTGGAAGATCTAATTCGATGAATGACAGCCATATGATTTCCAAGAAGCTTACTTCAAGCAGTGAGATGAGGCATGCTCGCCTTCAAGAATTTCTTCGATCGAGCGATACAATAAGACTAACATTGAATGCCTCGACAATGAAGTTGTCTTCTTATCGAGCATGGCCAAATATGCATGACAGTCGGTTCGCACTTTACAAGTTGCCATTGCGAGTTCCTAGAGCTGACCAAGAATATGCTGGTTTATGGGGAGGAACTTTTGGTTGGCCTCCCGGAAAGCCTTCTGAAGACAAGCCTGGAAAAGCTTTGTTCTTTCTTCTGCTCTCTTATGAGGAGTTGCAAGGACAACAGCTTCTCATTGCAACGAAAATTTTGGAAGGCACACACTATGTCTTACATCCTAATGGTTCAGCAATGTTTATAGTGAATATCAATGAGCCTTCGGATGAGCCATTTCCTTGGAGCACTGATGGAGACTCATTTCCGGTGGATATCAAGCATGTTTTCGTGGGGGAGGGAATTGCAAGCGGCTATGGCTTTAGATACCCTGGATCAAAGCCCGGCTCGCTCTTTGTTCTTCAAAATGGTATCCTTGCCTTCATTTGGAAGGAATCAAGGGCTGTTTTGACCTTGCAAAGACTCAACTTGCAAGAACTTCTAAAGAAGGGTGAAAGGGTACCTTCCTTGCCTCCCGTCGCCAATTTTTCGTATCTGACGAAGTCCTACTCCAACGTGTTTGCTGGCTTTCCGAGCGCTTCGAATTGTTTATCTACGCCAAGGCAAGGACTAGATTTATGA 1872 0.437 MLPESYDSSLLLSLPDDVFAIVSRFLSPRDVCSLGLCCKSLNALVTCEKIWLTQCDVLGIVPHKDLVEWRNGVCSYKALCRFLLSVQPLIGLWVHQNPELGNVVYVMPGFMSVVGCRVIPQELGPLGIEDGPILWACVFEIIADFDGSTVFFLHGREKGIDYIYPGSVKPVQKSCNVLLLEVEPGQQQKNVGALLQSKSFVHHSGVELSRNVCRSNSDISRSQRVNGNNETMVPFSKLAFSDRRKLLEVTTSQVRQRVPDMAIGPLFPGLRDDDENFQKELVLLWERRSFLSQIYELGSKQLVNRSSQDRVGPTHLELDGIGKSFDCSRAICNPLPEEDSRIKRKGLRGYFLDGLKHMLGRSNSMNDSHMISKKLTSSSEMRHARLQEFLRSSDTIRLTLNASTMKLSSYRAWPNMHDSRFALYKLPLRVPRADQEYAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEELQGQQLLIATKILEGTHYVLHPNGSAMFIVNINEPSDEPFPWSTDGDSFPVDIKHVFVGEGIASGYGFRYPGSKPGSLFVLQNGILAFIWKESRAVLTLQRLNLQELLKKGERVPSLPPVANFSYLTKSYSNVFAGFPSASNCLSTPRQGLDL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03138 623 Gene3D - 2 82 - -
Aip08g03138 623 SMART fbox_2 14 54 IPR001810 GO:0005515
Aip08g03138 623 SUPERFAMILY F-box domain 5 81 IPR036047 GO:0005515
Aip08g03138 623 ProSiteProfiles F-box domain profile. 8 54 IPR001810 GO:0005515
Aip08g03138 623 PANTHER F-BOX PROTEIN FAMILY-LIKE 3 619 IPR040275 -
Aip08g03138 623 Pfam F-box domain 11 52 IPR001810 GO:0005515
Aip08g03138 623 PANTHER F-BOX PROTEIN FAMILY-LIKE 3 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03138 Aip-Chr8 121621064 121625034 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03138 - - gsj:114415803 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03436 03 112289040 112292205 Aip08g03138 08 121621064 121625034 PCT