Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03436 ATGTCGGTACCTGGTACCATTGATTCAAACTCAAATTCAAGCTTGTTTCTTTCTCTGCCTGATGATGTGTTTGCCATGGTGTCACGCTTCCTCTTGCCCAGAGATGTGTGTAGTCTCAGCTTATGCTGCAGGAGCCTCTATGCTCTTGCAGCCTGTGAGAAAGTGTGGCTTACACAGTGTGACATGGTGGGGATAGTTCCCCATAAAGACCTTGTTGACTGGAGAACCGGTGTCTCATCATACAAGGCGATTTGCCGTTTTCTTCTCAATATTAAACCCTTGATTGGGATATGGGTTCATCAGAATCCTGAGCTTGGGAACCTTGTCTATGTCATGCCTGGTTTCGTGTCGGTTGTTGGGTGTAGGATAATCCCTCAGGAGCTTGGTCCAATGGGGATTCATGATGGTCCAATCCTATGGGCTCCTGTGTTTGAAATTATTGGTGATTTTGATGGTTCACCAACATTTTTTCTTCATGGGAGGGAGAAGGGGTTGGACTATATTTGTCATGGATCATTCAAGTCCATAAACAAATCTTGCAATGTACTATTGCTTGAGGTTGAACCAAGGGAAAAATGTATAGGAAATAGGGAAAATTCTAGGTTACAAGGAGTGGTTGGAAATAATAATAAGGCAATGGTTCCCTTCGGCAGGTTGTCTCTAAGTGATAGGAAAAAGTTGCTTGAGTTCACTACTAGGCATGTTCGGCAATTGGTTCCTAATATGGCAATGGGACCCTTGTTTCCAAGGTTAAGGGATGGCTATGAGAATTTCCAGAAAGAATTGGTGCTGTTGAGGGGAAGAAGGGAGATCCTTAGTCAAATGTACAGGCTCGATCATAGTCAAGTTCATAACATAGAAAATTCTGAGGAGGCTGTTGGTCCTAAGCAATTAGAACAAGATGACAGAAGAAAGAGTATCGAGTGTTCAAGGGCTTTAACTATTCTTCTGGATGGGGAGGGCAGTGATACACAATATAACAAGAGAAAAAATGGTGTAAAATTCTGGGGTAGCCTTAAACAGATGCTAGGAGGGTCTAGCTCAAACAACGGCCGTCATGAGAAGAAGCATGTGCGGCTTGAAGAATTTCTTGGATCAAATGATACAATAATGCTGACATTAAAGGCCTCAACTGTAAAATTATCTGCTTATCGAGCATGGCCAAATATGCCTGAGAGTTGGTTTGCACTTTACAAGATGCCATTGCAAGATCCAACAGAGGACCAAGTTTATGCCGGTTTATGGGGAGGAACTTTTGGTTGGCCTCCTGGAAAACCTTCCGAAGACAAGCCTGGAAAGGCTTTATTCTTTCTTCTGCTCTCTTATGAGGAGTCTCATGGACAACAACTTCTCATTGCAACCAAAATATTGGAAGGCACACATTATGTGTTACATCCAAATGGTTCAGCAATGTTTATAGTGAATATCAACGAGCCTTCATCTGAACCATTTCCTTGGAACTCTGATGCTGACTCCTATCCGATTAATATCAAGCATTCTTTCACGGGTGAGGGTATTGCAAATGGTTATGGATTCAGATACCCTGGATCAAAGCCTGGTTCCCTCTTTGAATTTCAAGACGGTGTCCTTGCCTTCATTTGGAAGGACTCGAGGTCTGTTTTGACGTTGCAGAGACTTAACTTGCAACAGCTTTTGAAGAAGGGAGAAAGGGTGCCTTGTCTGCCTCCCATCACAAATTTTTCATGCTTGACAAAATCCTACTCAAATGTGTTTACTGGATTTCCTGATGCTTACACAAGTTCATCGTCACCAAGGTAG 1779 0.4283 MSVPGTIDSNSNSSLFLSLPDDVFAMVSRFLLPRDVCSLSLCCRSLYALAACEKVWLTQCDMVGIVPHKDLVDWRTGVSSYKAICRFLLNIKPLIGIWVHQNPELGNLVYVMPGFVSVVGCRIIPQELGPMGIHDGPILWAPVFEIIGDFDGSPTFFLHGREKGLDYICHGSFKSINKSCNVLLLEVEPREKCIGNRENSRLQGVVGNNNKAMVPFGRLSLSDRKKLLEFTTRHVRQLVPNMAMGPLFPRLRDGYENFQKELVLLRGRREILSQMYRLDHSQVHNIENSEEAVGPKQLEQDDRRKSIECSRALTILLDGEGSDTQYNKRKNGVKFWGSLKQMLGGSSSNNGRHEKKHVRLEEFLGSNDTIMLTLKASTVKLSAYRAWPNMPESWFALYKMPLQDPTEDQVYAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEESHGQQLLIATKILEGTHYVLHPNGSAMFIVNINEPSSEPFPWNSDADSYPINIKHSFTGEGIANGYGFRYPGSKPGSLFEFQDGVLAFIWKDSRSVLTLQRLNLQQLLKKGERVPCLPPITNFSCLTKSYSNVFTGFPDAYTSSSSPR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03436 592 PANTHER F-BOX PROTEIN FAMILY-LIKE 11 592 IPR040275 -
Aip03g03436 592 SUPERFAMILY F-box domain 7 398 IPR036047 GO:0005515
Aip03g03436 592 Gene3D - 3 87 - -
Aip03g03436 592 ProSiteProfiles F-box domain profile. 13 59 IPR001810 GO:0005515
Aip03g03436 592 PANTHER F-BOX PROTEIN FAMILY-LIKE 11 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03436 Aip-Chr3 112289040 112292205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03436 - - adu:107480208 1174.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03436 03 112289040 112292205 Aip08g03138 08 121621064 121625034 PCT