Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03104 ATGGCTTCAAACAAAGTCATTGCCACCATTTTGGTGCTCTCTCTCTTAGCCTACTCAACACTCACTCATGCCAATTGCCCACCAAAAAAAGCAACTCCACCACCTTCACCGCCGGTGACGCCGCCACCGTCACCAAAACCAACACCACCAACTCCGACTCCGTCTCCGAAAGTAACACCTCCAACTCCTACTCCGACACCACCAACTCCGACTCCGTCGCCGAAAGTAACACCTCCAACTCCTTCTACTCCATGTCCACCAACTCCAACTCCATCTCCACCATCCCAAGAAAAATGCCCTAAAGATACCCTAAAGTTAGGGGCTTGTGCTGACCTTTTAGGGCTTGTTAACATCATTATTGGGACTCCACCATCAAGCCAGTGTTGTGCATTGATTAAGGGTTTGGCTGATTTGGAAGCAGCACTTTGCCTTTGCACTGCAATTAAGGCCAATGTGCTTGGAATCAACTTGAATGTGCCTATCACACTTGAATTGATCCTTAGTGCATGCCAAAAAACTGTCCCTCCTGGCTTCCAATGTCCTTAA 546 0.4835 MASNKVIATILVLSLLAYSTLTHANCPPKKATPPPSPPVTPPPSPKPTPPTPTPSPKVTPPTPTPTPPTPTPSPKVTPPTPSTPCPPTPTPSPPSQEKCPKDTLKLGACADLLGLVNIIIGTPPSSQCCALIKGLADLEAALCLCTAIKANVLGINLNVPITLELILSACQKTVPPGFQCP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03104 181 SMART aai_6 99 180 IPR016140 -
Aip08g03104 181 MobiDBLite consensus disorder prediction 24 99 - -
Aip08g03104 181 PANTHER - 71 181 - -
Aip08g03104 181 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 102 181 IPR036312 -
Aip08g03104 181 PRINTS Proline rich extensin signature 26 38 - -
Aip08g03104 181 PRINTS Proline rich extensin signature 38 59 - -
Aip08g03104 181 PRINTS Proline rich extensin signature 61 77 - -
Aip08g03104 181 CDD HPS_like 98 180 IPR027923 -
Aip08g03104 181 Pfam Hydrophobic seed protein 99 181 IPR027923 -
Aip08g03104 181 MobiDBLite consensus disorder prediction 28 96 - -
Aip08g03104 181 Gene3D - 94 181 IPR036312 -
Aip08g03104 181 PANTHER LIPID TRANSFER PROTEIN 71 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03104 Aip-Chr8 121069222 121070755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03104 87 181 Acyl Lipid Metabolism Gene Families AT4G22490 39.175 9.65e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03104 - - gmx:100526941 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03104 08 121069222 121070755 Aip08g03104 08 121069222 121070755 ECH
Aip06g03380 06 130592804 130593910 Aip08g03104 08 121069222 121070755 PCT